Glycine soja (wild soybean): 114376091
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Entry
114376091 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114376091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114376091
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114376091
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114376091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
Other DBs
NCBI-GeneID:
114376091
NCBI-ProteinID:
XP_028189809
LinkDB
All DBs
Position
11:complement(38105400..38125623)
Genome browser
AA seq
1226 aa
AA seq
DB search
MVAKPGSVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEIFDDFTSTKLRIWLDN
PVLYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPI
MLQSKLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRNSFS
DRREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDT
TDREIYVNLISCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQ
PVMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLMLGTCSCFLCDDFVTSNLKLFLM
DKKYFCWRIYVLFSHILGFGWLLLSSLFSFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG
HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM
LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES
WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL
PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM
GGAYPGLYLCTSPSRFVRPVRNISIASNGSENIELIGPFEQVFMEIRCPDGGDGGRKSSF
PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL
QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY
QTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT
SSIHTLKRKGSEAVYVDYVAADVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQ
LWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSV
TKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRH
MVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDY
HIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGMETVAMPYVF
RYLAAELAAMNIKMTLKLSDGAGVGA
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggtggctaaaccgggttcggttccggacttcgaggcgctgcgggagctcttcaagcat
cacatagagtccttcgattacatggtcgatgctggattagataccatgctcggacacatc
aaacccgtcgaaattttcgatgatttcacttccacaaagcttagaatttggttggataat
ccagtgctgtatccgccgcagaaggagcggatttcgaggacaatgcgggaggctttactt
ccgtttgaatgtagacaggcaaagatttcatattcagggaagattactatagatgtttgc
tttcaatataatgatgggcctattatcagagaaaatgtaaattttgggcagtttcccata
atgctgcagtcaaagttatgcaacttgagaggtgctgatccccagaaacttgtgtcctac
aaggaagaagcatcggagatgggtggttacttcatcttgaatggccttgagagagttatc
cgactgttaattttgccaaaacggaattatcctatgagtatggtgcggaattcatttagt
gacaggcgtgaaggatatacagataaagcagttgtaataaggtgtgtaagagctgatcag
tcctcattatcagtaagattgtattaccttcgtaatgggagtgcaagacttggtttctgg
ttaagaggaagggagtacttgcttcctgtgggcattattttgaaggctctcattgacaca
actgaccgtgaaatttatgtaaatttgataagctgctataatgagaagtatgaaaaggga
aagggtgctgttgggacccagcttgttggtgaaagggcaaaaataatcttagatgaactt
cgagatttgtctcttttcactcgtcttcaatgtctagaatatattggagagcacttccaa
cctgttatgaatgaacttaagaatgacagttatcctattgtggctgatgctgttttgaag
gactgcatattagttcatctggataacaattttgacaaattcaatcttctcatgttaggc
acttgctcttgttttttatgcgatgattttgtaactagtaaccttaaattgtttcttatg
gacaagaaatatttttgctggaggatttatgtattgttttctcacattttgggttttggt
tggctcctactttcttccctctttagcttcatgttgcagaaacttttctcacttatagat
cagacatcggtgccggacaaccctgattccttgcaaaatcatgaggttttactccctgga
cacctgattacactttatctcaaggaaaaactggaagattggctgcaaaagggaagaagg
cttcttctggatgagattgataaaaaaagcaagaaatttgatttcagtgacattgttcaa
gttaagaaagtcatggataaaaattcaccaaagcaagtcagtacagcagttgaaaacatg
ttgaaaactggaagattggttacacaaacgggtctagatctgcagcagagggcaggttat
acagttcaggctgaaaggctaaattttttacgttttctatcacatttccgtgctgttcat
cgaggggcctcatttgctggacttcgtaccacaactgtgcggaagctgttacctgaatct
tggggttttctctgccctgtgcacacacctgatggagagccctgtggattgttgaatcat
atgacttgcactagtaggataacgtcattctttgattctcaaggaaacattaaagattat
tttaaaataaaaatgtccatcctaaatgttttattggaggttgggatgacaccatcattg
ccaaagatatttcttcctggtccacctgaagctcttactgttctcttagatggttgtgtt
gttggttgtatagcttccagtgaagtggagaaagttgtggctcacatacgagaattaaaa
gtgtcatctgtcgcagtgattcctgatgatatggaagtaggatatgttcctttgagcatg
ggtggtgcctatcctggtctctacctgtgcacatccccttctagatttgttcggccagtt
agaaatatatcaattgcttccaatggaagtgaaaacatagaactcattgggccatttgag
caggtttttatggaaattagatgtcctgatggtggggatggtggaagaaaaagttcattt
cctgcaactcacgaagaaattcatccaacagtaatgcttagtgtagttgctaatctcaca
ccatggtcagatcataatcagagtccacgaaatatgtaccagtgtcagatggcaaagcaa
acaatggcattttcttcacaaactattcaacatcgtgcagatcaaaagttatatcatctt
cagactcctcagactcccattgtacgcacaagtacatatactaaatacaacattgatgaa
tttccaacaggcacaaatgctatagttgcagttctggcatatacgggatatgatatggag
gatgctatgattctaaataagtcatcagtggagcgtggaatgtttcatggacaaatatat
cagacagaaactattgacttaactgaacaagggggaaggtcagaccgatcttcaagaatg
ttcagaaaaagtaatatagagaaatcagcttgtccatccattgattcagatggacttcca
catgttggtcagatgatacggccagatgaaccctattgtagcatttataatgaagtaaca
agttccatacacaccttaaaaagaaagggttctgaagctgtttatgttgactatgttgct
gctgatgtaaaaaacaagaagcaccttcagaaggttaacatacgttttcgacatccccgg
aaccctgttattggtgataaatttagcagcagacatgggcagaaaggtgtttgctctcag
ctgtggccagatgttgatatgccattttctggaactactgggatgcgcccagatctcatt
atcaatcctcatgcatttccttccaggatgacaattgctatgcttttggaatctgttgct
gctaagggaggtagcttacgtggagaatttgtagatgcaactccatttcgaagttcagtt
acgaaagacagtggggagtctgattcaaaatcaggttcacttgtcgatgatcttggcctt
ctgctaagagaaaagggatttaattatcatggtttggaggttctatacagtggtgtttat
ggaacagaactaacatgtgagatatttattggacctgtttattatcagcggctgcgtcac
atggtttcagacaaatttcaggttcgatctactggcacaattgaccaggtcacccggcag
ccgataaaaggacgaaagcgtggtgggggaattcgatttggagaaatggaacgcgactct
ctgcttgcacatggagctgcatatcttctgcatgataggttgcacacgtgttctgattat
cacattgccgatgtttgttcactttgtggaagcatgcttgcaacaacattcatccaacct
caaaagcggccagttcgggagattggtgggctaccccctggaagagctccgaaaaaggtt
acttgtcatgcttgccaaacgagtaagggcatggagacagtcgccatgccctatgtattt
agatatttggctgctgagttagcagcaatgaatataaaaatgactcttaagctcagtgat
ggagccggagttggagcgtga
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