Glycine soja (wild soybean): 114378091
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Entry
114378091 CDS
T06057
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsj03016
]
114378091
Enzymes [BR:
gsj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
114378091
Transfer RNA biogenesis [BR:
gsj03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
114378091
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
114378091
NCBI-ProteinID:
XP_028192427
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Position
12:114722..119406
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AA seq
609 aa
AA seq
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MEDIEDLLIGSATPPGFRLPLAAAVGVGTKRNQLSSSSLSPSPAIPGTQTIFIKTFGCSH
NQSDSEYMAGQLSAFGYSLSDDPDHADLWLINTCTVKSPSQSAMDTIISKGKSSNKPLVV
AGCVPQGSRDLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKKLPALDLPKVRKN
KFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISEGVKEIWLSSEDTGA
YGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSFLHV
PVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFLQTINL
IKEYKLPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKVERI
WITDIASDGVHLVGHTKGYIQVLVLAPDNMLGTSAMVKITSVGRWSVFGDVIETVNPVSD
NKALNKLVPNQDCGNSAKTGGFSEEPEYCACGNDICCGQGTLENNDNSRGSAVPQNQSKR
NFIGWMLRKREHLHKTVESELASGSVKKQEGIMRKWDFVDKVLLGGISISILTIMALVVA
VMFRVIWSQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattgaggatttgctgattggaagtgcaactccaccgggctttcgtttgcca
ttagcagcggctgttggcgtggggacaaagcggaatcaactctcttcttcttcgctttcg
ccttcacctgcaatccctggcactcagactatcttcataaagacctttggctgctctcat
aaccagagtgacagtgaatatatggctggtcagctttctgcttttggctattcattgagc
gatgatcctgaccatgcagatctctggctcatcaacacttgcacggtcaaatccccaagt
caatctgctatggataccatcatatcaaaaggaaaatcttcaaataaaccactagttgtt
gctggttgtgtccctcaaggaagtcgggatttgaaagagctcgaaggaatcagcatagtt
ggagtccagcaaatcgatcgtgttgttgaaattgtagaggagactttaaaaggtcatgaa
gtgcgtcttttgacccgtaagaaattgccagcacttgaccttccaaaggtaaggaagaac
aagtttgttgagattcttcctattaatgttggttgtttaggtgcttgcacttattgcaag
acaaagcatgctcggggtcacctaggaagttacacaattgatagccttgttgggcgtgta
aaatctgtcatatctgaaggggttaaagagatatggcttagcagtgaagacactggagca
tatggtcgtgacattggtgtcaatcttccaacattattgaatgccttagtagcagaacta
ccagctgatgcaagcacaatgttgcgtattggaatgactaatccaccatatatacttgaa
cacttgaaggagattgctgagattttgcgccatccatgtgtttactcttttctgcatgta
ccggttcaatctggaagtgataccattttgagtgcaatgaatcgagaatatactgtgagc
gagttcaggactgttgtagatactctaactgagcttgtgccagagatgcagattgccact
gatataatatgtggatttcctggtgaaactgatgaagattttttgcaaactatcaacctt
attaaagagtacaagttacctcaagttcatatttcacaattttatcctcgaccagggaca
cctgctgcaaggatgaaaaaggttccaagtaatgtggttaagagaagaagccgtgaactg
acaaatgtctttgaatccttcacaccatactctgggatggaaggcaaagtggaaagaatt
tggattactgatattgcatctgatggagttcacttggttggtcatacaaaaggatatata
caagttcttgtacttgctccagacaatatgctgggaacttcagctatggttaagataaca
tccgtgggaaggtggtcagtttttggggatgtaattgagacagtgaaccctgtaagtgac
aataaagctctaaacaagctggttcctaatcaggattgcggtaactcagccaagactggt
ggattttcagaagagccagaatattgtgcctgtggaaatgacatctgttgtggtcagggt
actctcgaaaataatgataattcaagaggcagtgcagtgccacagaaccaaagcaaaaga
aatttcattggatggatgctgaggaagcgggagcatctgcacaaaacggttgagagtgag
cttgcctcgggatctgttaaaaagcaagaaggaatcatgaggaagtgggacttcgttgat
aaggttcttttgggtggaatatctatcagcatcttgacgattatggctctagtagtagct
gttatgtttagagttatttggtcccaataa
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