Glycine soja (wild soybean): 114392264
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Entry
114392264 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2-like isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114392264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114392264
Enzymes [BR:
gsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114392264
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114392264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
Other DBs
NCBI-GeneID:
114392264
NCBI-ProteinID:
XP_028209124
LinkDB
All DBs
Position
17:complement(23421336..23450789)
Genome browser
AA seq
1175 aa
AA seq
DB search
MVVKQGSIPDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDN
PVLYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPI
MLQSKLCNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFS
DRREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDT
TDREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQ
PVITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSL
QNHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPK
QVSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVL
LEVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDM
EVGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDG
GDGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQH
RADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEP
YCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV
DATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH
DRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGM
ETVAMPYVFRYLAAELAAMNIKMTLKLSDGAGAGA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggtggttaaacagggttcgattccggactttgaggcgctgcgagagctgttcaagcat
cacatagagtcctttgattacatggccgatgctggattggaaaccatgctcagacacatc
aaacccatcgaagttttcgacgatttcacttccacaaagcttagaatttggttggataat
ccggtgctgtatccgccgcagaaggagcggatttcgaggacaatgcgggaggctttactt
ccgtttgaatgcagacaggcaaagatttcttatgcagggaagattactatagatgtttgc
tttcaatataatgatgggcctattattagagaaaatataaattttgggcagtttcccata
atgctgcagtcaaagttatgcaacttgagaggtgctgatccccagaagcttgtgtcctac
agggaagaagcatcggaaatgggtggttacttcatcttgaatggtcttgagagagttatc
cgactgttaattttgccaaaacggaatcatccaatgagtatggtgcggaattcatttagt
gaccgacgggaaggatatacagataaagcaattgtaataaggtgtgtaagagctgaccaa
tcctcattatcagtaagattgtattaccttcgtaatgggagcgcaagacttggtttctgg
ttaagaggaagggagtacttgcttcctgtgggcattattttgaaggccctcattgacaca
actgaccgtgaaatttatgtaaatttgacaagctgctataatgagaagtatgaaaaggga
aaaggtgctgttgggacccagcttgttggtgaaagggcaaaaataatcttagatgaactt
cgagatctgtctcttttcactcgtcttcaatgtctagaatatattggagagcacttccaa
cctgttatcactgaacttaagaatgacagttatcctattgtggctgaagctgttttgaag
gactgcatattagttcatctggataacaattttgacaaattcaatcttctcatcttcatg
ttgcagaaacttttctcacttatagatcaaacatcggtgccggacaaccctgattccttg
caaaatcatgaggttttactccctggccacctgattacactttatctcaaggaaaaactg
gaagattggctgcaaaagggaaaaaggcttcttctggatgagattgataaaaaaagcaag
aaatttgatttcagtgacattgttcaggttaagaaagtcatggataaaaattcaccaaag
caagtcagtacagcagttgaaaatatgttgaaaactggaagattggttacacaaacgggt
ctagatctgcagcagagggcaggttatacagttcaggctgaaaggctaaattttttacgt
tttgtatcacattttcgtgccgttcatcgaggggcctcatttgcaggacttcgtaccaca
actgtgcggaagctgttacctgaatcttggggttttctttgccctgtgcacacacctgat
ggagagccctgtggattgttgaatcatatgacttgcactagtaggataacgtcattcttt
gattctcaaggaaacgtgaaagattattttaaaataaaaatgtccatcctaaatgtttta
ttggaggttgggatgacaccatcattgccaaagatatttcttcctggcccacctgaagct
cttactgttctcttagatggttgtgttgttggttgtatagcttccagtgaagcagagaaa
gttgtggctcacatacgagaattaaaagtgtcatctgccgcagtgattcctgatgatatg
gaagtgggatatgttcctttgagcatggggggggcctatcctggtctttacctgtgcaca
tccccttcaagatttgttcggccagtaagaaatatatcaattccttccaatggaagtgaa
aacattgaattcattgggccatttgagcaggtttttatggaaattagatgtcctgatggc
ggagatggtggaagaaaaagttcatttcctgcaactcatgaagaaattcatccaacagta
atgcttagtgtagttgctaatctcacaccatggtcagatcataatcagagtccacgaaat
atgtaccagtgtcagatggcaaagcaaacaatggcattttcttcacaaactattcaacat
cgtgcagatcaaaagttatatcatcttcagactcctcagactcccattgtacgcactagt
acatatactaaatacaacattgatgaatttccaacaggcacaaatgctatagtcgcagtt
ctggcatatacaggatatgatatggaggatgccatgattctaaataagtcatcagtggaa
cgtggaatgtttcatggacaaatatatcagacagaaactattgacttaactgaacaaggg
ggaaggttagaccgatcttcaagaatgttcagaaaaagtaatttagagaaatcagcttgt
ccctcaatcgattcagatggacttccacatgttggtcagatgatacggccagatgaaccc
tattgtagcatttataatgaagtaacaagttccatacacaccttaaaaagaaagggttct
gaagctgtttatgttgactatgttgctgttgatgtcaaaaacaagaagcaccttcaaaag
gttaacatacgctttcgacatcctcggaaccctgttattggtgataaatttagcagtaga
catgggcagaaaggcgtttgctctcagttgtggccagacgttgatatgccattttctgga
aatactgggatgcgcccagatctcattatcaatcctcatgcatttccttccaggatgaca
attgctatgcttttggaatctgttgctgctaagggaggtagcttgcgtggagaatttgta
gatgcaactccatttcgaagttcagtgaagaaagacagtggggagtctgattcaatgtca
ggttcaattgtcgatgatcttggccttctgctaagagaaaaaggatttaattatcacggt
ttggaggttctatatagtggtgtttatggaacggaactaacatgtgagatatttattgga
cctgtttattatcaacggctgcgtcacatggtttcagacaaatttcaggttcgatctact
ggcacaattgaccaggtcacccggcagccaataaaaggacgaaagcgtggtgggggaatt
cgatttggagaaatggaacgcgactctctgcttgcacatggagctgcatatcttctgcat
gataggttgcacacctgttctgattatcacattgctgatgtttgttcactttgtggaagc
atgcttacaacaacattcacccaacctcaaaagcggccagttcgggagattggtggtcta
cccccgggaagagctccgaaaaaggtcacttgtcatgcttgccaaacgagtaagggcatg
gagacagttgccatgccctatgtatttagatatttggctgccgagttagcagcaatgaat
ataaaaatgactcttaagctcagtgatggagctggagccggagcctga
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integrated database retrieval system
