KEGG   Glycine soja (wild soybean): 114400173
Entry
114400173         CDS       T06057                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    114400173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114400173
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     114400173
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor CDC45
Other DBs
NCBI-GeneID: 114400173
NCBI-ProteinID: XP_028218293
LinkDB
Position
19:complement(46903294..46913415)
AA seq 1273 aa
MAPSRRNTNGRSPLVNQQSQITSFFTKSASPSPSPTLSKTNPNPNPNPNPSPTPATPSPL
NPKRSKPLLVIGASTSPPSASPSLYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHV
VRYDDGEEESLDLSKEKIEWLQESSSKKLKRLRRGVPAVRKMMIDDDDEEVEEEESHKKD
DDDDDDSNDEDWGMKAALEDAGDAEEDTDLEDENDVAERAKGKKVETKKRKLSGTEKQEP
AKKSKSGVEVGKGAFKLSVLEPTSNLEIKETSNGTDNVAITEISERFALREAQKLRFLKE
DRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMGKFYELF
EMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRR
KEKGSKDKVVRREICSVVTKGTLTDGELLSANPEAAYLMALTEHHENHPTEVSEHLYGVC
IVDVATSRVILGQFKDDLECSVLCCILSEIRPVEIVKPAKLLSAETERVLLKHTRDPLVN
ELVPIVEFWDADKTVDQLKRIYGNSNDVSVNNNELDCLPDVLLELVKTGDDSRSALSALG
GALYYLRQAFLDERLLRFAKFELLPCSGFGDLASKPYMVLDAAALENLEIFENSRNGDSS
GTLYAQLNQCVTAFGKRLLKTWLARPLCHVESVKERQEAVAGLKGVNLPSALEFRKALYK
LPDMERLLARIFSSSEASGRNANRVVLYEDASKKQLQEFILALRGCEQMAQACFSLGVIL
SHVKSRQLHHLLTPGKVLPDVCMDLNHFKDAFDWVEANNSGRIIPREGVDTEYDSACKAV
KEIESSLLKHLKEQMKLLGSTSITYVNVGKDTYLLEVPENLSKNIPRDYELRSSRKGFFR
YWSPDIKVFLRELSHAESEKESLLKSTLQRLIGRFCEHHAKWKQLVSTTAELDVLISLAI
AGDYYEGPTCRPSFVGTLCTKEAPYLHAKSLGHPVLRSDTLGKGDFVPNDITIGGSDHAS
FILLTGPNMGGKSTLLRQVCLTVILAQVGADVPAESFDLSPVDRIFVRMGAKDNIMAGQS
TFLTELSETASMLSSATCNSLVALDELGRGTATSDGQAIAESVLEHLVRKVQCRGLFSTH
YHRLAVDYLKDPKVCLCHMACQVGSGIAGLDEVTFLYRLTPGACPKSYGVNVARIAGLPT
SVLQKAAAKSREFEATYGKCRKVSTVTNSPNKNWVDEIAAIIQILNNAATQETICVGSLS
ELQDKARELMQGC
NT seq 3822 nt   +upstreamnt  +downstreamnt
atggctccttcccgccgcaacaccaacggtcgatcaccgctcgtcaatcaacagagtcaa
atcacttccttcttcaccaaatccgcttccccttcgccctctcccactctctccaaaacc
aaccctaaccctaaccctaaccctaaccctagtcccacccctgctactccttctcctctc
aatcccaaacgctccaagccccttcttgtaatcggcgcttccacttctccaccctccgct
tcgccttctctctactttcaagagctcattggccgaaggatcaaggtttattggcccttg
gacaaagcctggtacgaaggctccgtcaaatccttcgatagcctcacctctaagcacgtg
gttcgttacgacgatggcgaagaagaatccctcgacctctccaaggagaagatcgagtgg
cttcaggaatcgtcttccaagaaacttaaacgcctgcgtcgcggcgtccccgccgttagg
aagatgatgatcgacgacgacgacgaagaagttgaagaagaagaaagtcacaaaaaagat
gatgatgatgatgatgattccaatgacgaagattgggggatgaaggctgcattggaggat
gctggggatgccgaagaagatacggatttagaggatgaaaacgacgtggcagagagggct
aaagggaaaaaggtagagactaaaaagcggaaactaagcggaacagagaaacaagagccg
gcaaaaaagagcaagagtggagtggaagttggtaagggagctttcaagctctcagtgttg
gagcctacgagtaatttggagattaaagagacatctaatggcactgacaatgttgcgatt
actgagatctctgaaagatttgcactgcgtgaagctcagaaattgcgcttcctgaaggaa
gatcgcagggatgccaagcgaaggcgaccaggggatgaaaattatgattcaagaacaatc
tacttgcctcctgatttcttaaggagtttgtcagatggtcagaaacaatggtgggagttc
aagtcaaagcatatggacaaagttttgtttttcaagatgggtaaattttatgagcttttt
gagatggatgcacatgtaggtgcgaaagagcttgacttgcagtatatgaagggagaccaa
cctcattgtggatttccagagaagaatttctcaatgaacgtggagaaactagctaggaag
ggttatcgagttcttgttgtagagcagactgaaacacctgaacagctggagcttcgtcgc
aaggagaagggctctaaagataaggttgtaaggcgtgaaatatgttcagtggttacaaaa
ggtacattaacagatggggagttgctgtcagcaaacccagaagctgcatatttaatggcc
ctgacggagcatcacgaaaatcacccaactgaagtttcagagcatctctatggtgtttgt
atagttgatgttgccacaagtagagtcattcttggacagtttaaggatgacttggagtgc
agtgtcttgtgctgtatcttatctgagatcaggcctgttgaaattgtgaaacctgctaaa
ctactcagtgctgaaacggagagagtactgctgaagcataccagagatcctttagtgaat
gaattagttccaattgtggaattctgggatgctgacaaaactgtggatcaattaaagaga
atttatgggaactctaatgatgttagtgttaacaataatgagttagattgcctgccagat
gttttactggagctggtgaaaacaggtgacgacagtagaagtgcactttcagcactaggt
ggtgctctgtattatctgagacaggcttttctagatgagagattgcttagatttgcaaag
tttgagttacttccttgttctggttttggtgatcttgcttcaaaaccctacatggttctt
gacgcggctgccctggagaatcttgagatttttgagaatagcaggaatggagattcttca
ggcacgctctatgcccaactaaaccaatgcgttactgcttttggaaagagattgctaaag
acttggcttgcaagaccattatgtcatgtggagtcagttaaggaacgccaggaagctgtt
gcaggtttgaagggagttaatctaccttctgcactagaatttcgaaaagcattatacaag
ctacctgacatggagcggttgcttgcccgcatcttttcctctagtgaagctagtggaagg
aatgctaatagagtggttctgtacgaggatgcttctaagaagcaactgcaagagtttatt
ttagctctgcgtggttgtgaacagatggctcaagcatgcttttcacttggtgtcattttg
agtcatgtaaaatctagacaacttcatcatctgttaacaccgggtaaagttcttcctgat
gtttgtatggatcttaatcatttcaaggatgcctttgattgggtggaagccaataattct
gggcgtataatacctcgtgaaggagttgacacagagtatgactcagcctgtaaggcggtt
aaagagattgagtccagtttattgaagcatcttaaggaacaaatgaaactacttggaagc
acatcaattacttatgtcaatgttggaaaggatacatacctattggaagttccagaaaat
ttgtctaagaatattcctcgagattatgaactgcgctcatccagaaaaggcttctttaga
tactggtctccagatattaaagttttcttaagagagctctcccatgctgaatctgaaaag
gagtccttgttgaaaagtacattgcagagattaattgggcgtttttgtgaacatcacgct
aagtggaagcagttggtgtctacaactgcagaactggatgtcttgatcagtttagcaatt
gctggtgactactatgaaggaccaacatgtagacctagttttgtaggcacattatgtaca
aaagaagctccttacctccatgccaaaagtttgggacacccagtccttaggagtgatacc
ttaggcaagggtgactttgtacccaatgacataaccattggtggttcagatcatgctagc
tttattcttctaacaggtcctaacatgggtgggaagtcaacccttcttcgtcaagtttgc
ttgactgtgattttggcccaggtaggagctgatgtcccagcagaaagttttgatttgtcc
cctgttgaccggatttttgttagaatgggggccaaagataatataatggcaggccaaagt
acatttttaactgagctttcagaaactgcatcaatgctgtcatcagctacttgtaattca
ttggtggctctggatgagcttgggcgagggactgcaacttctgatgggcaagccattgcg
gaatcagtattagaacatcttgtgcggaaggtgcagtgtcgcggattgttttctacccac
tatcatcgattagctgttgattatctcaaagatccgaaggtctgtctctgccacatggca
tgccaagttggtagtggaattgcaggtttagacgaagtcacctttctttacaggcttacc
cccggtgcttgccccaagagctatggtgttaatgttgctcggatagctggccttccaact
tctgtgcttcagaaggctgctgccaaatccagagaatttgaggccacttatggtaaatgc
agaaaggtatctactgtaacaaactctcccaataaaaattgggttgatgagatagcagca
atcattcaaatattgaacaacgcggcaacacaggaaaccatttgcgttggttccctaagt
gaacttcaggataaagcaagagaactaatgcaaggatgttaa

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