Glycine soja (wild soybean): 114400340
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Entry
114400340 CDS
T06057
Name
(RefSeq) lycopene beta cyclase, chloroplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00906
Carotenoid biosynthesis
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
Module
gsj_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
114400340
Enzymes [BR:
gsj01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
114400340
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
NAD_binding_8
FAD_oxidored
HI0933_like
Pyr_redox_3
Pyr_redox
FAD_binding_2
FAD_binding_3
GIDA
Trp_halogenase
TrkA_N
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
114400340
NCBI-ProteinID:
XP_028218577
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Position
19:39107795..39109827
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AA seq
507 aa
AA seq
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MIPMDTLLKTPNKLEFLHPLHGYSEKFSNSCSSRVQNQDFRFGSKKPIVRWGKCGNLRAS
SSALLELVPEFKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAID
PNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVFIDDKTKKDLDRPYGRVNRKLLKS
KMLQKCISNGVKFHQAKVIKVIHEETKSLLICNDGVTIQATVVLDATGFSRCLVQYDKLY
NPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLNNDMELKQRNCRIPTFLYAMPFSSTK
IFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEQCVIPMGGPLPVLPQRVVG
IGGTAGMVHPSTGYMVARTLAAAPIVANSIVQCLGSDRGFSGGETSAQVWKDLWPIQRRR
QREFFCFGMDILLKLDLPGTRRFFDAFFDLEPHYWHGFLSSRLFLPELIFFGLSLFSYAS
NTSRIEIMAKGTLPLVNMINNLVKDTE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatacctatggatactttgctcaaaacacctaacaagcttgagtttttgcaccccctt
cacggttactctgaaaaatttagcaattcatgttcctctagggtacaaaatcaggatttt
aggtttggttccaagaaaccaattgtgaggtggggtaaatgtggtaatttgagggctagt
agcagtgcccttttggagcttgttcctgaattcaagaaggagaatctggattttgaactt
cctttgtatgattcttcaaagggtgctgtagtggaccttgctgttgtgggaggaggtcct
gcagggcttgctgttgcacagcaggtttctgaggcagggctttcagtttgtgccattgat
ccaaaccccaggctgatttggcccaataattatggggtttgggtggatgagtttgaggcc
atggatttgcttgattgccttgacactacttggtccggcgcggtcgtcttcattgacgac
aaaacaaagaaggatctagacaggccttatggtagggtcaacaggaagctgctgaagtcc
aagatgctgcagaaatgcatatcaaatggcgtcaagtttcaccaagcaaaagttatcaag
gttattcacgaggagaccaaatctttgctgatttgtaatgatggtgtcactattcaggcc
actgtggttcttgatgcaactggcttttcaagatgccttgttcagtatgataaactgtat
aatccggggtaccaggttgcttatgggattttggccgaggttgatgaacacccgtttgat
gtagataaaatgcttttcatggattggagagattctcatctgaacaatgacatggagctg
aagcagagaaattgtaggatacccacctttttgtatgccatgcccttttcatccaccaag
atatttcttgaagaaacttctcttgtggcacgccctgggttacgaatggatgatatacaa
gaaagaatggttgcaaggttgaaacacttgggtattagagtgaaaagcatcgaagaagat
gagcagtgtgtcattcccatgggtggccccctcccagtacttccccaaagagttgtaggc
attggcggtaccgcaggaatggtgcatccttcgacagggtatatggtagcaaggaccctg
gctgcagctcctattgttgctaattctattgttcagtgccttggttctgatagaggtttt
tcaggaggcgaaacatctgcacaagtgtggaaagatttgtggcctatccaaaggaggcga
caaagggagttcttctgttttggtatggacatcttactcaagctggacttaccaggtaca
aggagattttttgatgcattttttgatctggaacctcattactggcatggattcttatca
tcaagactgtttcttcccgagctcatattttttggactctctctattttcttatgcttct
aatacatctaggatagagattatggcaaagggaactcttcctttggtaaacatgatcaac
aacttggtaaaagatacagaataa
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