Glycine soja (wild soybean): 114413496
Help
Entry
114413496 CDS
T06057
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj00061
Fatty acid biosynthesis
gsj00620
Pyruvate metabolism
gsj00640
Propanoate metabolism
gsj01100
Metabolic pathways
gsj01110
Biosynthesis of secondary metabolites
gsj01200
Carbon metabolism
gsj01212
Fatty acid metabolism
Module
gsj_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
114413496
00640 Propanoate metabolism
114413496
09103 Lipid metabolism
00061 Fatty acid biosynthesis
114413496
Enzymes [BR:
gsj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
114413496
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
114413496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_5
GARS_A
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
114413496
NCBI-ProteinID:
XP_028233747
LinkDB
All DBs
Position
5:complement(41979604..41987872)
Genome browser
AA seq
539 aa
AA seq
DB search
MEVTLSACKSISSPSVPVAALFAGKAGTKSSQCSFLAGANKVRFPRQVGQVSHVRKQRQT
RHCGALHATCSGDKILIANRGEIAVRVIRTAHELGIPCVAVYSTIDKDALHVKLADEAVC
IGEAPSSQSYLLIPNVLSAAISRRCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSI
RVMGDKATARETMKKAGVPTVPGSDGLLQSTEEAIRLANEIGFPVMIKATAGGGGRGMRL
AKEPDEFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKYGNVVHFGERDCS
IQRRNQKLLEEAPSPALTPELRKAMGDAAVAAAASIGYIGVGTIEFLLDERGSFYFMEMN
TRIQVEHPVTEMISSTDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRP
GPGRITAYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDT
IITGVPTTIDYHKLILDIEDFRNGKVDTAFIPKHEEELAMPPQKMVLANRVNELAGSTA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcacactttcagcgtgcaagtccattagctcgccttctgttcccgtcgcagct
ttatttgcggggaaagcaggaactaagagttcgcaatgcagttttttagctggagcaaac
aaagtgaggtttcctaggcaagtcggtcaagttagccacgttcgcaaacagcgccaaacg
cgtcactgtggtgctctccacgcgacttgcagcggtgacaagatcctgatcgcgaataga
ggcgagattgcggttcgcgttattcgaaccgctcatgaattggggattccgtgtgtggct
gtgtactccaccattgataaggacgcccttcatgtcaaactggctgatgaagctgtatgc
atcggcgaagcgccgagtagccagtcgtacttgctgatcccgaatgttctgtcggctgct
attagccgcagatgcacgatgttgcatcctggctatggttttcttgcggagaatgctgtg
tttgttgaaatgtgcagggaacatggaatcaactttattgggcccaaccctgacagtatt
cgggttatgggtgacaaagcaactgccagagagacaatgaagaaagcaggtgttcccacc
gttccaggaagtgatggccttttacagagcacagaagaagctattaggctggcaaatgag
attggtttccctgtgatgatcaaggcaacagctggtggtggaggacgtggcatgcgtctt
gctaaagaacctgatgagtttgtgaagttgttacagcaagctaagagtgaggcagctgct
gcatttggcaatgacggggtttatttggagaagtacattcaaaacccaaggcacattgag
ttccaggttcttgcagataaatatggtaatgttgttcactttggagaacgtgattgcagc
attcagaggcgtaatcagaaactgcttgaagaagcaccatctcctgccctgacccctgag
ttgcgaaaggcaatgggagatgcagcagttgctgctgctgcatctattggttacataggt
gttggaacgattgagtttcttttggatgaaagaggttccttttactttatggagatgaac
acacgtatccaggttgagcatcctgtgacagaaatgatttcctcaacagatttgatagaa
gagcaaattcgtgtagctatgggagaaaaacttcgatacaaacaggaggatattgtcctc
agaggacattctattgaatgccgtatcaatgcagaagatgcttttaagggatttagacca
gggccaggtagaattacagcatacttgccatctggaggtccatttgttagaatggatagc
catgtttatcctgattatgtggttcctccaagctatgactcccttcttggaaagctgatt
gtatgggctccaacaagagaaaaagcaattgaacgcatgaaaagggcacttgatgacact
attatcacaggagttcctactacaattgattatcataaacttatccttgacatagaggat
ttcagaaatggaaaggttgatactgcttttattccaaaacacgaggaagagttggcaatg
cctccgcagaagatggtactcgctaacagggtgaacgaactagctggttcaactgcctga
DBGET
integrated database retrieval system
