Glycine soja (wild soybean): 114419780
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Entry
114419780 CDS
T06057
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03020
RNA polymerase
gsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114419780
09124 Replication and repair
03420 Nucleotide excision repair
114419780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114419780
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114419780
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114419780
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114419780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Enterotoxin_b
Motif
Other DBs
NCBI-GeneID:
114419780
NCBI-ProteinID:
XP_028241364
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All DBs
Position
7:41782708..41785720
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AA seq
319 aa
AA seq
DB search
MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD
VTSKDLYSSDPTVSPVDFSDPSATDSDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTY
DDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSE
DTVEADDQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggaggagtatcctacgcgcgcatgcctcgggtcaaaatccgcgagctgaaggac
gactacgccaagttcgagctccgcgacaccgacgcgagcatcgccaacgcgctgcggcgc
gtgatgatcgcggaggtgccgacggtcgccatcgacctcgtggagatcgaggtcaactcc
tcggtgctcaatgacgagtttatcgctcacaggctgggcctcatccccctcactagcgag
cgcgccatgtccatgcgcttctcacgtgactgcgacgcgtgcgacggtgacggacagtgc
gagttttgctccgtcgagtttcatcttagggttaagtgcatgactgatcagaccctcgat
gttacgagcaaggacctctacagttctgaccctactgtcagtcccgttgatttctctgac
ccctctgccactgactccgacaacaacagggggattatcattgtgaagttgcggcgcgga
caagagctgaagctgagagcgatagctaggaaggggattgggaaggatcatgctaaatgg
tcacctgctgcaactgtcactttcatgtatgaaccggagattcatataaatgaggatttg
atggaaaccttgactctggaagagaaaagagaatgggttgacagtagtccaacccgtgtc
tttgaaattgatccagtgacacaacaggtgatggtggttgatgctgaggcatacacatat
gatgatgaggtgcttaagaaagcagaagctatgggcaagcctgggcttgtagaaatcatt
gcgaggcaggatagcttcatattcactgtggagtctactggagcagttaaagcttctcaa
ttggttctaaatgccatagaaattctcaagcagaagctggatgctgtgaggctatctgaa
gatacagtggaggctgatgatcagtttggcgagcttggtgcacatatgcgaggaggttga
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