Geobacter sulfurreducens KN400: KN400_3142
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Entry
KN400_3142 CDS
T01940
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gsk
Geobacter sulfurreducens KN400
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsk03009
]
KN400_3142 (rimO)
Enzymes [BR:
gsk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KN400_3142 (rimO)
Ribosome biogenesis [BR:
gsk03009
]
Prokaryotic type
ribosomal protein modification factors
KN400_3142 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADI85954
LinkDB
All DBs
Position
3405150..3406493
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AA seq
447 aa
AA seq
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MSNAKEKVSMVSLGCPKNLVDAEVMLGRLAKDRYEITTDEREADIIIVNTCSFIKEAKQE
SIDTILDLADRKQDGRCRLLIVTGCLPQRYQEELARELPEVDIFVGTGDYPRIAEIIEEK
SSRPEQLRYIGDPNFVFDESLTRLNSSPAYTAYLKIAEGCSNCCSYCVIPSLRGAFRSRP
LESVLAEARSLVAGGAREINLIAQDITTYGRDLPGAPSLETLIRELAAIDGLAWIRLLYA
YPDGITDGLIQTIKNEPKVCKYLDLPIQHISDPILKRMNRRSTEPQIRELVARLREEIPD
IALRTSLIVGFPGETEEDFRTLLHFVEEAQFDRLGVFCYSREEGTPAAEMPDQVSERVKR
ERYKKLMKAQARVSFKRNRRLIDTEEQVIVEGYSEETELLLKGRSSRQAPDIDGQVYITA
GNANVGDIVRLRITDSSDYDLIGEIIS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaacgcaaaagaaaaagtcagcatggtcagccttggctgccccaaaaatctggtg
gatgcagaggtaatgctcggccgcctggcaaaggaccgctacgagatcaccaccgatgag
cgcgaggcggacattatcatcgtcaacacctgttccttcatcaaagaggcgaaacaggag
agcatcgacacgatcctcgacctggccgaccggaaacaggacggccgctgccggctcctc
attgtgaccgggtgcctcccccagcgctaccaggaagagctggccagggaactgcccgag
gtggacatcttcgtgggcaccggcgactatccccgcatcgcggagatcatcgaggagaag
agttcgcggccggagcagctgcgctatatcggcgacccaaacttcgtattcgacgaaagc
ctcacgcgcctcaactcctccccggcctacaccgcctacctgaaaatcgccgagggatgc
tccaactgctgctcctactgcgtgatcccgtctctgcggggagccttccgctcccgtcct
ctggagagcgtcctcgctgaggcccgctccctcgtggccggcggggcgcgggagatcaac
ctgattgcccaggacatcaccacctacggccgcgacctgcccggcgcaccctccctggag
accctcatccgcgaactggccgccattgacggcctcgcctggatcagactcctctatgcc
taccccgacggtattaccgacggcctgatccagaccatcaagaacgaaccaaaagtctgc
aaatacctggacctgcccatccagcacatcagcgacccgatcctgaagcggatgaaccgc
cgcagcaccgagccccagatccgggagctcgtggccaggctgcgggaggagatcccggac
atcgcgctccgcacctccctcatcgtcggcttccccggtgaaacggaagaggacttccgc
acgctcctccatttcgtggaagaagcccagttcgaccgtctcggcgtgttctgctattca
cgcgaagaagggaccccggccgcggagatgcccgaccaggtctccgagcgggtgaagcgc
gagcgctacaaaaagcttatgaaggcccaggctcgggtatctttcaagcggaaccgccgg
ctcatcgacacggaagaacaggtcatcgtggaaggatacagcgaggagacagagctcctc
ctgaagggacgctcctcccgccaggcgcccgacatcgacggccaggtctacatcaccgcc
ggcaacgccaacgtgggtgacatcgtacgtcttcggattaccgattcctccgactacgat
ctcatcggcgagatcatctcctga
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