Galdieria sulphuraria: Gasu_04920
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Entry
Gasu_04920 CDS
T02926
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Gasu_04920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_04920
Enzymes [BR:
gsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Gasu_04920
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
Gasu_04920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
17090989
NCBI-ProteinID:
XP_005708925
UniProt:
M2X7C8
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MSSTVSTFQPIKLEVVKEQDTPVKISCIQFCVPRAEDVARTSVTRITSRDLYTQPLRKPA
AGGVLDLHLGPSDKTGQCQTCGESLATCVGHFGDISLAFPVFHMGYFKATYFILQCVCKA
CSRVLLPKELVSEFLHKLRSPITRANPSKRKAVLKNILKLCKSRKHCPFCGSPNGAVKKV
GVMKLIHDPFSSAKDTEEEKENFLRKFHFVADNLSDVSPHIQKAVDDLNPLRVLEILSRI
PPEDVILLGMDPTYNRPENLLLTNFPVPPACLRPSVCSDPTIGSNEDDLTMKLSEIVHIN
CILQQAMENGGNASLVMDDWELLQLECARYINADLPGLPPSATSGKTIRGLCQRLKGKQG
RFRGNLSGKRVDFSSRTVISPDPNLSIEQVGVPVYVAKQLTFPERVTKYNIKQLSKAVLN
GPDIHPGANFVELKDGKFGSWTKRFLRYGDRKKIAQELSLGLVVERHLRDNDIVLFNRQP
SLHRVSIMCHRVKVFPCRTFRLNECVCTPYNADFDGDEMNMHVPQTEEARAEAATLMCVQ
ENLVTPRNGEPLIAATQDFLSACYKFTCKDVYLDRAEFTRIIFLSGLQSVAYDLKLPNPA
IIKPFEMWTGKQAISFILRLCPGFQTMTAYVYEKQWSHPSGYESNFLAPHLCKNDGYVYI
RNGELLCGQLGKASLGSGSKRSLFYLLSREGGNSAAASAMSMISKFASRWFSDFGFSLGI
DDVTPSVILQARKDELLRAGYKDCDDLIEAFQSRTLEARPGCTVEQTLEVSINAVLSKIR
EDAGKVCIAAIDPKVNSAMAMALCGSKGSNINISQMISCVGQQTVNGCRVPDGFLGRALP
HFASGMSARTPWAKGFVKNSFFSGMTATEFFFHTMAGREGLVDTAVKTAETGYMQRRLMK
ALEDLSVNYDNTVRYSDGTVVQFLYGDDGMDPTVVEGASGANCPLNLEQLLEDSKAEGTI
KSKGEPRLNPDEVIHYADSLTFHSFGAFEDSESHLKILRDVKNFLSSIARKHEMELERIS
SSCSNGSMLRDTIDAAFGLRKSQLDALVRRIVHKLQRFKIEPGTAVGAIGAQSIGEPGTQ
MTLKTFHFAGVASMNITLGVPRIKEIINASPIINTPVITAELVSPNDITIARIVKGRIER
TTLGEICNFIKEVYRRNQVYISLQLDKELISRLQLDVDVNVVRNAIVNNSKLRLKENDIA
VVSDDRLHIFVPSKASGDLYFQMNSLKRQLPHVVVQGISSIKRAVIHQKDDKSYQLLVEG
SDLLSVMTTAGVEGTCTTSNHVIIVEKVLGIEAARKTVASEIQYTMASHGMSIDTRHVAL
LADVMSFRGEILGITRFGIGKMKTSAIMLASFEKTVDHLFDAALYKTQDDVVGVSECVIM
GMPVPLGTGLFGLLRNDRNSVVVPPPRKETILQKRNIYRRLGL
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgacagtttctacgtttcagcctataaaactagaggtagttaaggaacaagat
actccagttaagatatcttgtatacaattttgtgttcctagagcagaagatgtggcgagg
acgtcggtaacgagaattaccagccgagacctttacacacagccacttaggaaacctgca
gctggtggagtattggaccttcatcttggaccttctgataaaactggccagtgtcagacc
tgtggagagtcactggctacgtgcgttggacatttcggcgacatttccttggcatttcct
gtttttcacatgggttactttaaagccacatacttcatattgcaatgtgtgtgcaaagcc
tgttcaagagtcctactgccaaaggagcttgtttctgagtttcttcataaacttcgatcg
ccaatcacgagagctaatccgtccaaaagaaaggcagtattgaagaatattctaaaactt
tgcaagtctcgaaaacactgtcctttttgtggctctcccaatggagctgtgaaaaaggtt
ggagtgatgaaattaatacacgatccgttttcgtcagccaaagacactgaagaagaaaag
gagaattttttgagaaaatttcattttgtcgcggacaatttgagtgacgttagcccgcat
attcagaaggcagtagacgatctcaatccactcagagttttggaaatccttagtcgaatt
cccccagaagatgttatactcttaggaatggatcctacttacaatagaccagagaatttg
ctcttaaccaactttccagttccacctgcttgtcttcgccctagcgtttgttctgatcca
acgattgggtcaaatgaggatgatttgaccatgaagctgtctgaaattgtgcatatcaat
tgcattcttcaacaagcgatggaaaacggtggaaacgcttcacttgtcatggatgattgg
gaactgctgcagttggaatgtgccaggtatatcaatgctgatcttcctggattgccaccc
tccgctactagtgggaagactatccggggtctttgccagaggttgaaaggaaaacaagga
agattccgaggaaatctttctggaaagagagtcgatttttcaagcagaacagttatctct
cccgatcctaatctaagcattgagcaagttggggttccagtttatgttgcaaagcagttg
acatttcccgaacgagttacaaagtataatatcaagcagttgtcgaaggcagtcttgaat
ggtcctgatattcatcctggagccaattttgttgagctgaaggacggcaagtttggaagc
tggacgaagcgttttcttcgttacggggatcgtaaaaagatagcacaagagttatcactt
ggacttgtagttgaacgtcatttgagagataatgatatagttttgttcaacagacaacca
agtctacatcgggtttcaatcatgtgccacagagtgaaagtttttccgtgccgaactttc
cgcctaaacgaatgtgtttgtactccgtataacgcagactttgatggcgatgagatgaac
atgcacgttcctcagactgaagaggcaagagctgaggccgccactctcatgtgtgtccaa
gagaatttggttacccctcgtaatggagagcctctaattgcagcaactcaagattttctt
tcggcttgttataaattcacatgtaaagatgtgtatttagacagggccgaatttactcgt
attatatttctttctggattgcaaagcgtcgcatatgatttgaagcttccaaatcctgcg
ataattaaaccttttgaaatgtggactggaaaacaagcaatttcgttcattctacgattg
tgtccggggtttcagacaatgactgcttatgtatatgaaaaacaatggtcacatccatcg
ggatatgagagtaacttcctggcgcctcatctttgcaaaaatgatggttacgtttatatt
cgtaatggagagctgttatgtggacagctggggaaagcttcattgggtagtggttccaaa
cgttccttgttttatttactttcaagagaaggaggcaattcggctgcagccagtgctatg
tcaatgatttccaaatttgcttctcgttggttctccgattttggattttctttgggtatt
gatgatgttactccatctgtgattttacaagccagaaaagatgaactacttcgtgcagga
tataaggactgtgatgatttgatagaagcttttcaaagtagaacattggaggctaggcct
ggttgtactgtggaacaaactcttgaagtttccattaatgccgtcttatccaaaattcga
gaagacgctggaaaagtttgcattgcagccatcgacccaaaggttaatagtgcaatggct
atggcattgtgcggatcaaagggaagcaacataaatatttctcaaatgattagctgcgtt
ggacaacaaacagtgaatggttgtcgtgtaccagatgggtttcttggaagagctttgcca
cattttgcgagtggaatgagtgcaagaactccatgggccaaaggttttgtgaagaatagt
ttctttagtggaatgactgccacagagtttttctttcacacaatggcaggacgagaaggg
cttgtcgatacagcagtcaagacagctgagacaggatatatgcaacgcagactgatgaag
gcgttggaagatttaagtgtgaattatgataacactgtccgttatagtgacggtacagtt
gtacagtttctgtatggggacgatggcatggatcctactgttgtggagggtgcatctggt
gcaaactgtcccttgaatttggaacagctgttagaagattcgaaggctgaaggtacaata
aagagcaaaggagagcctcgtttgaatccagatgaagtgatacattatgccgattcacta
acttttcattcttttggagcttttgaagatagcgagagccatttaaagattctgagggac
gttaaaaatttcctctcatccatcgctagaaagcatgaaatggaacttgagagaatatcg
tcatcttgttcaaatggctctatgcttcgagacacaatcgatgcggcgtttggtttgaga
aaatcgcaattggatgctttggtacgtagaatcgttcacaaactgcaaagattcaaaata
gaacctggcactgcggtgggagcgatcggggcacaaagtattggtgagcctggaacacaa
atgactctaaaaacctttcactttgctggagttgcttctatgaacattactttgggagtt
ccaagaatcaaagaaattatcaatgcttctccaatcatcaatactcctgttataaccgca
gagcttgtttctcctaacgatatcactattgcgagaatcgtcaagggacgaattgaaagg
acgactttgggagaaatttgcaattttataaaggaagtctatcggaggaatcaagtttat
atatcactgcagctggacaaagagttgatctccaggttacagttagatgttgatgtaaat
gtcgtccgaaatgcgattgtaaacaattcaaagttacgtttaaaggagaacgatattgct
gtagtgagtgatgatagattgcatatatttgttccatccaaagcctcgggagacttatat
ttccaaatgaattctctgaaacgtcagttacctcatgtagttgtacaagggatctcgtcc
attaagagagctgtgattcatcagaaagacgacaaatcttaccagttactagttgaaggc
tctgacttgttatcagtgatgactactgcgggagttgagggaacttgcacgacgtccaac
catgtaataattgttgagaaggttttaggaattgaagctgccaggaagacggttgcctcg
gaaattcagtacactatggcaagtcatggcatgtcaatagatacaagacatgttgcgcta
ttggcggatgtgatgagttttcgaggtgaaattttagggatcaccaggttcggaattgga
aagatgaagacctcggcaataatgctggcttcatttgagaagacagtggatcatttattt
gatgctgctctatataagacacaagatgatgtggttggggtttcagaatgtgtcattatg
ggtatgcctgtgcctctaggaacaggtttgtttggattattaaggaatgatcgtaacagt
gtcgtagttcctcctcctagaaaagaaaccattttacaaaaacgtaatatctaccggaga
ctaggcctataa
DBGET
integrated database retrieval system
