Galdieria sulphuraria: Gasu_40940
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Entry
Gasu_40940 CDS
T02926
Name
(RefSeq) DNA-directed RNA polymerase II subunit C
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03020
RNA polymerase
gsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Gasu_40940
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_40940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_40940
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_40940
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Gasu_40940
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Gasu_40940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
17087237
NCBI-ProteinID:
XP_005704918
UniProt:
M2XXQ9
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MPFAKTPTIHINRQTFNEMDFIITDTDTSVANAIRRVAIAQVPTMAIDLIHMQVNTSSLH
DELLAHRLGLIPLTSHRVDEFEYTRDCPYCSDHCLHCSVTFELDVQCTEEAMTVTSQDLV
NKSAHESQLAASVQPVHFSGEYNPTLSEENGLNGIVLAKLAKGQRIQLTAIAKKGVGKEH
AKWSPVCTISYQTDPSVQFNLNKLNTLLSEEAKRALVKSSDECLAIDPKSNQLIYETAFT
LGRISLPLDCVKKMTLT
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgctaaaacacctacgattcatatcaaccgacaaactttcaacgaaatggac
tttatcataacagatacagatacttctgtagcaaacgctataagaagagtagctattgca
caagttcctactatggctatagacttgatacatatgcaagtcaatacttcttccttacac
gatgagttgttagcccatcgactgggtttgatacctttaacaagtcatagagtggatgag
tttgaatatactcgagattgtccttattgtagtgaccactgtttacactgttcggttact
tttgaattggacgtacaatgtacagaagaagctatgacagtgacttctcaagacttggtg
aataagagtgcccatgagagtcaacttgctgctagtgttcaacctgttcacttttcaggt
gaatacaatccaactctatcggaagaaaatggattgaatggtattgttttggcaaagttg
gcaaaaggacaacgaattcaattgacagccatagctaagaaaggagtgggtaaggaacat
gccaaatggtctcctgtttgtactatttcttatcaaacagacccatcagtgcagttcaat
ttgaataagctgaatactttgctttctgaggaagccaaaagagcgttggtgaaatcaagt
gacgagtgtttggccatcgatcccaaaagcaatcaactgatatatgagacagcttttact
ttgggaagaatttctttacctttggattgtgtaaagaagatgactcttacttga
DBGET
integrated database retrieval system