Galdieria sulphuraria: Gasu_62090
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Entry
Gasu_62090 CDS
T02926
Name
(RefSeq) DNA polymerase delta catalytic chain
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03030
DNA replication
gsl03410
Base excision repair
gsl03420
Nucleotide excision repair
gsl03430
Mismatch repair
gsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gasu_62090
03410 Base excision repair
Gasu_62090
03420 Nucleotide excision repair
Gasu_62090
03430 Mismatch repair
Gasu_62090
03440 Homologous recombination
Gasu_62090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsl03032
]
Gasu_62090
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_62090
Enzymes [BR:
gsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gasu_62090
DNA replication proteins [BR:
gsl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Gasu_62090
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Gasu_62090
MMR (mismatch excision repair)
DNA polymerase delta complex
Gasu_62090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
17085131
NCBI-ProteinID:
XP_005702664
UniProt:
M2XRS1
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MTFKRNTYLKVDPHPPPILSFFDKVVSLQSIQGKVVYHEVLTDKRKLFFDLDGPSGSFGE
EEVEQLIQACLCRLPGIDNERGNVVVLWSSKLEEKASCHVVFSTTLLPDGDISHDLASYL
SDLKIFPYVDKGVYHPNHSLRCPLSSKMKTERFFRCPMDGDILCRSLVSCIYHSTHLVKL
KTISKTKKEIPLDVVHADVLVWCSYINRKLGADLRFRKIENGRFLLFDRTEAYIKVFLSQ
RTSGKRNSFEYFGMNTFVSFHERGRSLYVFYKSADDCYFQKFSPTSKVLLKPDKLSPNEL
SELEQLKQKGELSYADEYREVFEPRSTFSRFICVATRRPDRWLKLSKKGAAFHCFHSPLQ
HYFMYKSENDHYLQELYENSSLCNVVSFDIEVSAQSSNIFPDPRQKNSQVYMISVVTENR
KMLLTSKETLPIDGVEVRLFQDETCLLEGFCNAIKELDPDIITGYNICSFDLPFLYIRGI
FQGVDVLAKIGRTVTIPYKVLWYDDIMETDIPGRIILDAYLKFRRELRASRCRLQDLSEQ
YLNSSKDDVTLEEIALAGEGKDVKITTKVGSYCVQDSVLVLHLIEKLQAIPSTFAMSKYT
CTAPQTLYTRGVTHRIRNLSVCFGKNRFAFPVVDYDDFDDDDEKDNEENEEKEGDKKYEG
AFVFAKPGVYSQVKAFDFNSLYPSIMIAMNICQSSFLEERLVSVESNIMESPIITEEKVE
IQVGDKIYAFRRKPIGLFPFIAKFLIERRKELKAQGKKIDQNAVKIVTNSLYGALGAKGG
FRPAAESVTAFGRYFIRLARNLAQEKGWEVPYIDTDSLFVVGGPPDSLGDEISEQIGVPP
LRLLLDKKMDKLLVLKKKKYAMLKEDGRIVCSGLLNNRDDSCGVFREVELSCVFARFEGD
PLPELKLEELQNYDFEKFIFKARFKAEVSRNSKYFFLFSRVLDRSVSMVDFVVSKEGGNS
ISERYFPAESFPKENLDWNYYLSSCRKIVDTFR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaaacgaaacacttacttgaaagtggaccctcatcctcctccaatcctgtct
tttttcgacaaggtagtttcattacagtctattcaggggaaggttgtttatcatgaagtt
cttactgacaaaagaaagctgttttttgatttggatgggccatctgggtctttcggagaa
gaagaagtggaacaactaattcaagcctgtctctgtcgcctgcctggtatagacaatgaa
aggggaaacgtggttgttttatggtcttccaagttagaagagaaagcgtcatgccacgtc
gtattttcaaccactctgctgccggacggcgatatttcccacgatttggctagttattta
tccgacttgaagattttcccctatgtggacaagggagtctatcatccaaaccattctctg
cggtgtcccttgagttcgaaaatgaaaacagaaaggtttttcagatgtccgatggatggg
gatattctatgtcggtctttggtttcctgtatctatcacagcacccacttggtgaaattg
aaaacaatctccaagactaagaaggaaatcccattggacgttgtccatgcagatgtcttg
gtgtggtgctcctacattaatcggaaattgggggctgacttacgatttcggaaaatcgaa
aatggccgctttttgctttttgaccgcacagaagcgtacattaaagtttttttgtcgcag
aggacctcgggaaaaaggaattcgtttgagtatttcggaatgaacacgttcgtttcgttt
catgagagaggtcgttctttatatgtcttctataaatcggcagatgactgctatttccaa
aagttttctccgacgtccaaagttcttctcaaaccagataagctgtcgcctaatgaactt
tcagaacttgagcagctgaagcagaaaggagagttatcctacgcagacgaatatcgagag
gtttttgaaccaagaagtactttttctcgtttcatttgcgtagcgactcgtagaccagac
cgttggttgaagttatccaaaaaaggtgccgcctttcattgtttccatagtcctttacag
cattacttcatgtacaagtcagaaaacgatcattatttgcaagaattgtacgaaaactcc
tccttgtgtaatgtggtctccttcgatatagaagtcagtgctcagtcttcaaacattttc
cctgatcctcggcagaagaattcgcaagtctatatgatttcagtcgtcactgagaaccga
aagatgctacttacatcgaaggaaacactccctattgacggtgtggaggttcgcttgttt
caggatgagacctgccttttggaaggcttctgcaatgctatcaaagagcttgatcccgat
ataatcaccgggtacaacatttgcagcttcgaccttccctttctctacattcgaggaatc
ttccaaggggtggatgtgctagccaaaataggaaggactgttaccattccttacaaagtt
ttgtggtatgatgatataatggaaactgatattcctggcagaatcattttggacgcctat
ctcaagtttcgtcgtgaacttcgagcgagtagatgtcgcttacaagacctatcagaacaa
tatttgaattcttccaaagacgacgttactttggaagaaatagcactggcaggagagggg
aaggacgtgaagattactaccaaagtgggttcctactgcgtacaggattctgtgctagtg
cttcatctgattgaaaagttacaggccataccttctacttttgctatgagcaaatatacc
tgcactgcccctcaaactctttacaccagaggagtgactcaccgaattcgaaatttgagt
gtttgctttggaaagaaccgatttgcgtttccagtagtcgactacgacgacttcgacgat
gacgacgagaaagataacgaggaaaacgaggaaaaagaaggagacaagaagtatgaaggc
gcctttgtattcgcgaaacccggtgtttacagccaggtaaaagcttttgactttaacagc
ttgtatccttccatcatgatagccatgaacatctgccagtcttcctttttggaagaaaga
ctggtttcagtggaaagcaatattatggagagtcctattattactgaggaaaaggtcgag
atccaagtaggagacaaaatctatgcttttcgaaggaagcctataggacttttccctttc
attgcaaagtttcttattgagcgaagaaaagaacttaaagctcaagggaagaaaatagac
caaaatgcagtgaaaatcgttaccaacagtctttatggagcgcttggtgcgaaaggcggt
ttccgtcctgctgctgagagtgtaactgcgtttgggcgttatttcattcgcttagcgaga
aacctagctcaggaaaaaggttgggaagttccttatattgacacggactctttgtttgtg
gtaggcggacctcctgactctctaggagacgaaatctctgagcaaatcggagttcctccg
ttgcgcttattgttggataagaaaatggataaattgttggtgttgaagaaaaaaaaatac
gctatgttgaaggaagatggtcgaatagtttgcagtggtctgttaaacaacagagatgac
tcttgcggggttttcagagaagttgaactatcctgcgttttcgccaggttcgaaggcgat
ccacttcctgagctcaaattggaagagcttcaaaattacgactttgaaaaatttattttc
aaagcccgttttaaggccgaagttagtcgaaactcaaagtatttttttctgttttcgagg
gttctagatagaagtgtgtccatggttgattttgtcgtttctaaagaaggaggaaattcc
atttcggaacgatacttcccagcggagtcgttcccaaaggagaacttggactggaactac
tacctttcgagctgtcggaagatagtggacacttttcgctaa
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