Gracilibacillus salinarum: MUN87_09550
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Entry
MUN87_09550 CDS
T09433
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
gsm
Gracilibacillus salinarum
Pathway
gsm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN87_09550 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsm03021
]
MUN87_09550 (rpoE)
03400 DNA repair and recombination proteins [BR:
gsm03400
]
MUN87_09550 (rpoE)
Transcription machinery [BR:
gsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN87_09550 (rpoE)
DNA repair and recombination proteins [BR:
gsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN87_09550 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
OAD_gamma
Motif
Other DBs
NCBI-ProteinID:
UOQ87098
LinkDB
All DBs
Position
complement(2049934..2050497)
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AA seq
187 aa
AA seq
DB search
MSLQDLTKERAEDMAMIDIATLILEEENKALNFREIFDRVAKIKGLTEAQMDMSISQFYT
DLNIDGRFMTKGSNLWGLKRWYPVEEIDEDITPVPKKKKKKKAAAKKKKKKAAPVEEVDE
TEDLDESIDQDSDNDVVGFDDEDLDSDVDDLSDDEDDFDFDDDEDLDDDIDEDFDDDDEE
DDEEDNK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttacaggacttaacgaaagaacgcgcagaagacatggcaatgattgatattgca
acattgattttagaagaagaaaataaagcattgaatttccgtgagatttttgaccgtgta
gcgaagatcaaaggattaacagaagcacaaatggatatgtcgatctcacaattttatact
gatttaaatatagatggccgttttatgacaaaaggctcgaacctttggggcttaaagaga
tggtatccagtcgaagaaattgatgaagatattacaccagttccgaagaagaagaaaaag
aaaaaggcagcagccaagaagaagaaaaagaaagcagcaccagtagaagaagtggatgaa
acagaagatctggatgaatccattgaccaggacagtgataatgatgttgtcggcttcgat
gatgaagatcttgattcagatgtcgatgatctgtcagatgatgaagatgatttcgatttt
gatgatgacgaagatctcgacgatgatatcgatgaagattttgacgatgatgatgaggaa
gacgacgaagaggacaataaataa
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