Gavia stellata (red-throated loon): 104256235
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Entry
104256235 CDS
T08384
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gste
Gavia stellata (red-throated loon)
Pathway
gste04010
MAPK signaling pathway
gste04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gste00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104256235
04020 Calcium signaling pathway
104256235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gste04040
]
104256235
Ion channels [BR:
gste04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104256235
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
104256235
NCBI-ProteinID:
XP_009808885
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
SPPGGTLTCELQDCPFCASLLEDPEFAFSESDSCDSDSNGVYEXQDLRHGDHRDQLQQQR
GRRRKKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPD
ELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGG
LSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGC
KFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALM
TFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYSLA
VTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSYDQK
SLSSLRSSPCANWGTSSNWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDS
DDAKSSTVSRPSLHRRAESLDYRSSMDLPELLQLPTMRHSLSVSPMAILPAEYQDCNGKM
VHVPSEFFLRVDGHKEDAMDYEDDMEDSYCYRIRKVLEPYKPQWCKSHEDWSLYLFSPQN
RFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVA
EMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLL
RTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDG
PDVKNITTKTDCTNAHYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQ
QPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRL
EKKRRSKEIYLSEAQRRPYYADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYN
QPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEE
IEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLF
FIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRE
CTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEI
ELEMSRGATASATSGSRGASLRPEDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPF
PLHEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPTESLQLAVRSPHHEGRHRWKILPP
HVTPRSPTLNKLLCRQ
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
agcccgccgggcggcacgctgacctgtgagctgcaggactgtcccttctgcgccagcctc
ctggaggaccccgagttcgccttcagcgagtccgacagctgtgactccgacagcaatggc
gtctacgagnaccaggacctgcggcatggtgaccacagagaccagctccagcagcagcgg
ggcaggaggaggaagaagaagaaaaaacccaaggagaggaacaaggtcacccgcctgtgg
aaggcttttggcagcaagctgaagaggattgtggagagcaagtacttcaaccgggggatt
atgatagccatcctcatcaacacgctgagcatgggcatcgagtaccatgagcagccagac
gagttgaccaacgccttggagatcagtaacatcgtcttcacaagcatgtttgccctggag
atgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaacatc
tttgacgggatcatagttgtcatcagcgtctgggagatcatcggccagtcggacggaggc
ctttctgtgctacgaacttttcggctgctccgggtgctgaaactggtgcgtttcatgcct
gccctccgtcgccagctggtggtcctgatgaagacaatggacaatgtagccaccttctgc
atgttactcatgctcttcatctttatcttcagcattctcggcatgcatctttttggatgc
aagttcagcctgaaaactgatacgggagatacagttccagacagaaagaattttgattcc
ttactttgggctattgtgaccgtatttcagatccttactcaagaggactggaacgtggtc
ctgtacaatgggatggcatctacatcctcgtgggcagcactctactttgtggccctgatg
acctttggcaattatgtgctcttcaaccttcttgttgccattctggtagaaggcttccag
gcagagggtgatgccaataggtcagacacagatgaggacaagacgtctgccaacttcgat
gatgattttgagaagctgaaagacctccgagcaacagagatgaagatgtactcacttgcc
gtcaccccaaatggacacctggagggcaggggaagcatgccacctcctataatcatgcgc
actgctgccacaccaatgcccacaccgaagtgttccccacacatggattcggtgcacact
tttgtggactcgaggagagggagtaacgcttcgctagaccccttgagctacgatcagaag
tctttgtccagcctccgcagttccccttgcgccaactggggcaccagcagcaactgggga
agccgacgctcaagctggaatagcctgggtagagccccaagcctcaagaagaagaaccag
tcaggagaaagagagtccttgctctctggggaggggaaaggcagcacagacgatgactcc
gatgatgccaagtccagcacagtcagcaggccctcgttgcaccgccgggcagagtccctg
gactaccgcagctccatggacctgcctgagctgctccagttgcccaccatgcgccactcg
ctcagtgtcagccccatggccattctgcctgctgagtaccaagactgcaacggcaagatg
gttcacgtccccagcgagttcttcctgcgtgtcgatggccacaaggaggatgccatggac
tatgaggatgacatggaggatagttactgctaccgaattcgtaaagtcctggagccctac
aagccacagtggtgcaagagtcatgaagactggtccctctacttgttttccccacagaat
cggttccgagtgatgtgccagaaggtcattgcccacaaaatgtttgatcacgtggtgctg
gtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagacccacac
agcacggaaaggatattcctaagtgtttctaattacatcttcactgcaatctttgtggct
gaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctatctgcag
agcagctggaacgtcctggatggagtcctggtctttgtatctatcattgacattattgtc
tccatggcatcggcaggcggagctaaaatcctgggtgtccttcgcgttttgagacttcta
cggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggtagaa
accttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgctttcttc
attatctttgggattttaggggttcagctttttaaaggcaagttctactactgtgatggt
cctgatgtaaaaaacatcactacgaagactgactgcactaacgcacactacaaatgggtt
cgtcggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctgtcc
tccaaagatggctgggtgaacatcatgtacgatggtttggatgctgtcggtattgaccaa
cagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctcatc
gtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaactttcacaagtgc
cgacagcaccaggaggcggaggaggcccggcgtcgggaggagaagcggcttagacgcttg
gagaaaaagcgcaggagtaaggagatatacctgtctgaagcccagcgcaggccttactac
gctgactattccccagcgcggaagtacattcacaccctctgcaccagccactatcttgac
ctcttcatcacgttcatcattggagtcaatgtcatcactatgtcaatggagcactacaac
cagccaaagtccctggatgaagccctaaagtactgcaactatgtgttcaccatagttttt
gtgttcgaggcagttctgaagttggtggcatttggttttcgaaggttctttaaggacagg
tggaatcagctggatctggccatagttctcttatcaattgtgggaatcacgctggaggag
attgagatgaatgctgcactgcccatcaatcccacaataatacgcatcatgcgggtgctg
agaatagcaagagtgctgaaactgcttaaaatggccaccgggatgcgagctctcctggac
acagtggtacaagcgcttccccaggtagggaaccttggcctactttttatgctcctgttt
tttatctatgctgccctgggagtggaactgtttggcaagctagactgcagtgaagaaaat
ccttgtgaaggtctgagccggcacgcaactttcaccaacttcggcatggcctttctcacc
ctcttcagggtgtcaacaggggacaactggaatggtatcatgaaggacactctccgggaa
tgcactcgggaagacaagcactgcctcagttacctgcctgttatctctcctgtctacttc
gtcaccttcgtcctcatcgcacagttcgtcctagtcaacgtagtggtggcagtgctgatg
aagcacttggaggagagcaacaaggaggccaaggaggatgctgagatggatgctgagatc
gagttggagatgtccagaggagcaactgcctcagccaccagcgggagcaggggcgcctct
ctgaggccagaggactctcaaaacctgctgacggtccgcaagatctccgtttcccgtatg
cactccctgcccaacgacagctacatgttccggccggtgatgccagcgaaagcccctttc
cccctccatgaggtggagatggagacatatccctgcaaatcccaaagagggtccatcacc
tccatccgctcccagcccgtgggaacgtgttcctctctgagagtcccaacggagtccctc
cagctggcagtccgttctccccaccacgaaggccgccaccgctggaagatcctccccccc
catgtcacacctcgatctcctactctcaacaagctgctgtgcagacag
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