Geomonas subterranea: KP001_11055
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Entry
KP001_11055 CDS
T07936
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gsub
Geomonas subterranea
Pathway
gsub00010
Glycolysis / Gluconeogenesis
gsub00020
Citrate cycle (TCA cycle)
gsub00620
Pyruvate metabolism
gsub00650
Butanoate metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01120
Microbial metabolism in diverse environments
gsub01200
Carbon metabolism
gsub01210
2-Oxocarboxylic acid metabolism
Module
gsub_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KP001_11055 (nifJ)
00020 Citrate cycle (TCA cycle)
KP001_11055 (nifJ)
00620 Pyruvate metabolism
KP001_11055 (nifJ)
00650 Butanoate metabolism
KP001_11055 (nifJ)
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
KP001_11055 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
TPP_enzyme_C
Fer4_7
Fer4_21
Fer4
Fer4_10
Fer4_16
Fer4_8
Fer4_2
Fer4_6
Fer4_9
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
QXE89008
LinkDB
All DBs
Position
complement(2544029..2547613)
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AA seq
1194 aa
AA seq
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MSRKMVTIDGNTAAAHVAHATNEVIAIYPITPSSVMGEISDAKSAAGEKNIWGTVPLVSE
LQSEGGAAGAVHGALQAGALTTTFTASQGLLLMIPNMYKIAGELTSTVFHVSARAIATQA
LSIFGDHSDVMSCRATGWAMLCSNNVQEVMDFALIAQAATLRSRIPFLHFFDGFRTSHEV
QKVEALSRDDMRAMIDNELVNAHRARCLTPDRPVLRGSAQNPDVYFQGRETVNRFYPATI
EIVEKEMEKFAALTGRRYGVVEYAGAPDAERVIVIMGSGADTVQESVVALNARGEKVGVV
KIHLYRPFPLEAFVKALPASVRRIAVLDRTKEPGALGEPLYLDVRTAIGEGMAAGLSNFV
GYPVIVGGRYGLGSKEFTPAMAKAVFDNLKENQPKSNFVVGINDDVTGASLDYDSSFRTA
MEGTYEAMFFGLGSDGTVGANKNSIKIIGEATDNYAQAYFVYDSKKAGTITTSHLRFGKK
PINAPYLIDNADFVACHNFTFLEKYDMLGKAKPGATFLLCSPFDHEEVWDKMPVEVQKQI
IDKKLKVYTINAIKLAEELGLGARINVIMQTAFFKISGIIPLESAIAEIKGAIKKSYGKA
GEKVVAMNNAAVDQALLNIHEVAVPASPSSGITMPPPVGAGAPHFVKEVTGRIIAGFGDD
LPVSAMPIDGTFPTATSQYEKRNIAVEIPVWDEKLCIQCAICSFVCPHAAIRVKAYPAEA
LSGAPAGFKCADSKMAELKEHKVTFQVAPEDCTGCGACAHNCPAKDKENPGHKALDMRFQ
PPLRAAEAANYHFFLGLPDLDPALVKLDTLRGSQLVRPLFEYSGACAGCGETPYLKLLSQ
LFGDRALIANATGCTSIYGGNLPTTPWAKRADGRGPAWSNSLFEDNAEFGYGMRLAVDKF
NQAARELLEQLIGSGCGSCVAIAPLMREILDAGQSGQAAIEAQRARVARLKDALANCDEE
AAAQLLPIADYLVQKSVWCVGGDGWAYDIGYGGLDHVIASGKNVNILVLDTEVYSNTGGQ
ASKSTPIGAVAQFAAGGKSMAKKDLGMMAMAYGHVYVASVSLANPGQVVKAFIEAEAHDG
PSLIIAYSHCIAHGIDMTRGVDEQKKAVSSGYWPLYRYNPALSAQGKNPLQLDSKAPTTS
FEEYAGGENRYKVLRKMNPEAADQLMQKASAWAADRFDYYTKLAALSFGEEGKK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaaaatggtaaccatagacggcaacaccgcggccgcccacgtggcccacgcc
accaacgaggtgatcgcgatctacccgatcaccccgtcctcggtgatgggggagatctcc
gacgcgaagagcgcggcgggggagaagaacatctgggggacggtgccgctggtctccgag
ctgcagtccgagggtggcgcggccggggcggtgcacggcgcgctgcaggcgggggcgctc
accacgaccttcaccgcgagccaggggcttttgctgatgatccccaacatgtacaagatc
gccggcgagctcacctccaccgtgttccacgtctcggcgcgggccatcgccacccaggcg
ctgtccatcttcggcgaccattccgacgtcatgtcctgccgcgccaccggctgggccatg
ctctgttccaacaacgtgcaggaggtgatggacttcgccctgatcgcccaggcggccacc
ctgcgctcccgcatcccgttcctgcactttttcgacggcttccgcacctcccacgaggtg
cagaaggtggaggcgctctcccgcgacgacatgcgcgccatgatcgacaacgagctggtc
aacgcgcaccgcgcccgctgcctcaccccggaccggccggtcttgcgcggtagtgcccaa
aacccggacgtctacttccaggggcgcgagacggtcaaccggttctacccggcgacgatc
gagatcgtggaaaaggagatggagaagttcgcggcactcaccgggcgcaggtatggcgtg
gtggagtatgccggtgcgccggacgccgagcgggtcatcgtcatcatgggctcgggcgcc
gacacggtgcaggagagcgtggtggccctgaacgcgcggggggagaaggtgggggtggtg
aaaatccacctgtaccgtccctttccacttgaggccttcgtcaaggcgctccccgcatcg
gtgcgccgcatcgcggtgctggaccgcaccaaggagcccggcgccttgggcgagccgctc
taccttgacgtgcgcaccgcgatcggcgaggggatggcggccggcctcagcaacttcgtc
ggctacccggtcatcgtcggcgggcgctacggtctgggctccaaggagttcaccccggcc
atggccaaggcggtgtttgacaacctgaaggagaaccagccgaaaagcaacttcgtggtc
ggcatcaacgacgacgtgaccggcgcaagcctcgactacgacagctccttcaggaccgcg
atggaagggacctacgaggcgatgttcttcggcctgggctcggacggcaccgtgggggcc
aacaagaactccatcaagatcatcggcgaggcgaccgacaactacgcccaggcctacttc
gtctacgactccaagaaggcggggaccatcaccacctcccacctgcgcttcggcaagaag
ccgatcaacgcgccgtacctgatcgacaacgccgacttcgtcgcctgccacaacttcacc
ttcctggagaagtacgacatgctgggcaaggcgaagccgggtgcgaccttcctgctctgc
tccccgttcgaccacgaagaggtctgggacaagatgccggtcgaggtgcaaaagcagatc
atcgacaagaagctcaaggtctacaccataaacgccatcaagctcgccgaggagcttggc
cttggcgcccgcatcaacgtgatcatgcagaccgccttcttcaagatctccgggatcatc
ccgctcgagagtgccatcgccgagatcaagggggccatcaagaagagctacggcaaggcg
ggggagaaggtggtggccatgaacaacgccgccgtcgaccaggcgcttttgaacatccac
gaggtggccgtcccggcgtcaccgtccagcggcatcactatgccgccgccggtcggggcg
ggcgcgccgcacttcgtgaaggaggtcaccggccgcatcatcgccggcttcggcgacgac
cttccggtctccgccatgcccatcgacggcaccttcccgaccgcgacctcgcagtacgag
aagcgcaacatcgcggtggagatcccggtctgggacgagaagctctgcatccagtgcgcc
atctgctccttcgtctgcccgcacgccgccatccgggtcaaggcctacccggccgaggcg
ctttccggggcacccgcggggttcaagtgcgccgactccaagatggcggagctgaaggag
cacaaggtgaccttccaggtcgccccggaggattgcaccggctgcggtgcctgcgcccac
aactgcccggcgaaggacaaggagaacccggggcacaaggcgctggacatgcggttccag
ccccccttgcgtgccgccgaggccgccaactaccacttcttcctggggcttcccgacctc
gatccggcgctggtgaagctggacaccctgcgcggcagccagctggtgcgccccctgttc
gagtactccggcgcctgcgctggctgcggcgagacaccgtacctgaagcttctctcccag
ctcttcggggaccgggcgctcatcgccaacgccaccggctgcacctcgatctacggcggc
aacctccccacaacaccgtgggcgaaacgtgccgacgggcgcggcccggcctggtccaac
tcgctcttcgaggacaacgctgagttcggctacggcatgaggctcgcggtggacaagttc
aaccaggcggcacgggagctcctggagcagctcatcggcagcggctgcggcagctgtgtc
gccatcgccccgctgatgcgggagatcctcgacgccggtcagtccggtcaggccgccatt
gaagcgcagcgcgcccgggtggccaggctcaaggatgcgctcgccaactgcgacgaggag
gccgcggcgcagcttctccccatcgcggattacctggtgcagaaatcggtctggtgcgtg
gggggcgacggctgggcctacgacatcggctacggcggcctggaccacgtcatcgcctcg
gggaagaacgtgaacatcctggtgctcgacaccgaggtctattccaacaccggcgggcag
gcatccaaatcgaccccgatcggcgcggtggcacagttcgccgccggcggcaagtccatg
gccaagaaggacctcgggatgatggcgatggcctacggtcacgtctacgtcgcgtcggtt
tcccttgccaacccgggacaggtggtcaaggccttcatcgaggccgaggcccacgacggt
ccctcgctgatcatcgcctactcacactgcatcgcccacggcatcgacatgacccgcggc
gtggacgagcagaaaaaggcggtctcctcgggctattggccgctgtaccgctacaacccg
gcactctccgcacaaggcaaaaacccgctgcagttggacagcaaggcgcccaccaccagc
ttcgaggagtacgcggggggggagaaccgctacaaggtgctcaggaagatgaaccccgag
gcggccgaccagttgatgcagaaggcgagcgcctgggccgcggaccgtttcgactactac
acgaaactcgcggcgctcagcttcggtgaggaagggaaaaagtag
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