Geomonas subterranea: KP001_11065
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Entry
KP001_11065 CDS
T07936
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00020
Citrate cycle (TCA cycle)
gsub00640
Propanoate metabolism
gsub00660
C5-Branched dibasic acid metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01120
Microbial metabolism in diverse environments
gsub01200
Carbon metabolism
Module
gsub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gsub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP001_11065 (sucD)
00640 Propanoate metabolism
KP001_11065 (sucD)
00660 C5-Branched dibasic acid metabolism
KP001_11065 (sucD)
Enzymes [BR:
gsub01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KP001_11065 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXE89010
LinkDB
All DBs
Position
complement(2547867..2548742)
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AA seq
291 aa
AA seq
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MSILIGKDTRVITQGITGATGLFHAQGAREYGTQMVGGVTPGKGGTVIDGFPVYDTVAEA
VHATGATASVIYVPPPFAADSIMEAVDAGIELVCCITEGIPVLDMVKVKQYLVGKKTRLV
GPNCPGVITPGECKIGIMPGYIHKPGKIGVVSRSGTLTYEAVWQLTCIGLGQSTCVGIGG
DPVNGTSHIDCLRLFEEDPDTEAVIMIGEIGGSAEEEAARFVKENMTKPVAAYIAGVTAP
PGKRMGHAGAIISGGKGTATEKVAVLKECGISVAATPAEMAQALLKVYQPK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcatactgatcggcaaggataccagggtcatcacgcaggggatcaccggcgcgacc
ggcctcttccacgcgcagggcgcccgcgagtacggcacgcagatggtgggcggggtgacc
cccggcaagggggggacggtgatcgacggcttcccggtctacgacaccgtcgccgaggcc
gtgcacgcgaccggcgccaccgcgagcgtcatctacgtcccgccgccgttcgccgccgac
tccatcatggaggcggtggacgccggcatcgaactcgtctgctgcatcaccgaggggatt
ccggtcctcgacatggtcaaggttaagcagtacctggtgggcaagaagacccggctggtc
ggccccaactgcccgggcgtgattacccccggcgagtgcaagatcggcatcatgcccggc
tacatccacaagcccggcaagatcggcgtcgtttcccgttccggcacgctcacctacgag
gcggtgtggcagctgacctgcatcggcctcggccagtcaacctgcgtcggcatcggcggc
gacccggtgaacggcaccagccacatcgactgcctgcgcctgttcgaggaagacccggac
accgaggcggtgatcatgatcggcgagatcggcggcagcgccgaggaggaggccgcgcgc
ttcgtcaaggagaacatgaccaagcccgttgcggcctatatcgcaggtgtcaccgctccc
ccgggcaagaggatggggcacgccggcgccatcatctccggcggcaaggggaccgcgacc
gagaaggttgcggtgctgaaggagtgcggcatcagcgtcgcggcgaccccggccgagatg
gcccaggcgctgctcaaggtctaccaaccgaaataa
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