Geomonas subterranea: KP001_12635
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Entry
KP001_12635 CDS
T07936
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00020
Citrate cycle (TCA cycle)
gsub00785
Lipoic acid metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
gsub01120
Microbial metabolism in diverse environments
gsub01200
Carbon metabolism
gsub01210
2-Oxocarboxylic acid metabolism
Module
gsub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gsub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP001_12635
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KP001_12635
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
KP001_12635
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QXE89305
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Position
complement(2907017..2909704)
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AA seq
895 aa
AA seq
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MGILENLTPQWIESQYELWKQNPQQLSEEWRAFFTGFELADARSAGAAPPTGDEALKQSA
VQSLIYRYRDIGHLLACTDPLSPCKIEHPLLSLSAFGLEPSDLEQTFVTRRFMRRSAKLK
EILQVLRSTYCGSVGVEFMHLQDPDERQWLIDRMEPGGNRGFFTPEQRLMLLKKLKEAAL
FERELHKRFPGQTRFSLEGGDILIPLLDAAVAKAASLGVTDVVFGMPHRGRLNVLCNIFG
MPYENMFAEFADNAEYGVVGEGDVKYHKGFSVDLPVGEGGSVHLTLTSNPSHLEAIDPVV
QGKCRARQDRIGEAGETRVLPLLIHGDAAFSGQGVVAETLNLSQLAGYRTGGTLHIVLNN
QIGFTTSAADARSSHYATDVAKMVQAPVFHVYGDDAEAVIHVTELAVAYRDRYRKDVVVE
VICYRRHGHNEGDEPYFTQPLMYQQIKLRPQLHSLYEMELLGEGFPEEELKAIENEVAQR
LSQAGERQAAPVESAFLARWSGMKPGVAKVAVPTSVAADTLLDLSGRLSRIPEGFQPHPK
VVGVLQKRHDAITKGGPLDWGNVESLAYASLLSSGVSVRLSGQDVRRGTFSHRHSTLFDQ
QTGETYLPHCSVLDKGARFCAFDSMLAEFSVLGFEYGYSLEAPDALTIWEAQYGDFVNGA
QVIIDQFLVSGEAKWERSSGLVLMLPHGYEGQGAEHSSARIERFLELAAAGNIQAVYPTT
PAQLFHVLRRQMLQPFRKPLILFTPKSLLRHPDCVSRLEELSSGSFREVIAEPAVGESVR
QVLICSGKIYYDLLGRIRKDQLQGHALLRIEQLYPLPVEQLRDELQRYPAGARFTWVQEE
PRNMGAWRFIHESLIELLGGVPRYVGRPDAAAPASGSHRLDRVEQERIVDEALKI
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggtatattagaaaatctgaccccccagtggatcgagagccagtacgagctctggaag
cagaacccccagcaactctccgaggagtggcgtgccttcttcaccggtttcgagctggcg
gatgcacggtccgccggcgccgcgccccccacgggagacgaggcacttaaacaatccgca
gtacaatcactcatctaccggtaccgggacatcgggcacctcctcgcctgcaccgatccc
ctttccccatgcaagatagagcatcccctgctctccctttccgccttcgggctggagccg
tccgacctcgagcagaccttcgtcaccaggcgcttcatgagaaggagcgccaagctaaag
gagatcctgcaggtgctgcgcagcacctactgcggttcggtcggcgtcgagttcatgcac
ctgcaggacccggacgagcgccaatggctcatcgaccgcatggagccaggcggaaaccgc
gggttcttcacgccggagcagcgccttatgctgctcaagaagctcaaggaagccgcgctg
ttcgagcgcgagctgcacaagaggttccccgggcagaccaggttctccctcgagggggga
gatatcctcattcccctgctcgatgccgccgtcgccaaggccgcctcgctcggcgtaacc
gacgtcgtcttcgggatgccgcaccgcggccgcctcaacgtcctttgcaacatcttcggg
atgccctacgagaacatgttcgccgagttcgccgacaacgcggagtacggcgtggtgggc
gagggtgacgtgaagtaccacaagggattctcggtcgaccttcccgtcggggagggcggt
tccgtgcatctcaccctcacctccaatcccagccacctggaagcgatcgacccggtggtg
caggggaaatgccgcgcccggcaggaccggatcggcgaggccggggagacccgggtgctg
ccgctgctcatccacggggatgccgccttctccggccagggagtggtcgccgagacgctg
aacctgtcgcagctggccggctaccggaccgggggcacccttcacatcgtgctcaacaac
cagatcggcttcaccaccagcgccgccgatgcccgctccagccactacgcgaccgacgtc
gccaagatggtccaggccccggtcttccacgtctacggcgacgacgccgaggcggtgatc
cacgtaaccgagcttgccgtcgcctaccgggaccgctaccgcaaggacgtggtggtcgag
gtgatctgctaccgcaggcacgggcataacgaaggtgacgagccttacttcacccagccc
ctcatgtaccagcagatcaagcttcgtccgcaactccactcgctctacgagatggagctt
ttgggtgaaggattcccggaagaagagctgaaggcgatcgagaacgaggtcgcgcagcgc
ctgtcgcaggcgggcgagcgccaggccgcaccggtggaatccgctttcctggcacgctgg
agcggcatgaaacccggtgtggccaaggtcgcggtacccacctcggtcgccgccgacact
ctgctcgacctctccgggcgactgtcccgcattcccgagggattccagccgcaccccaag
gtggtcggggtgcttcaaaagcgccacgacgccatcaccaaggggggaccgctggactgg
ggaaacgttgagagcctcgcctatgcctcgctcctttcctcgggcgtttcggtccggctt
tccggccaggacgtccgccggggcaccttcagccatcggcactccacgcttttcgatcag
cagaccggcgagacctacctgccgcattgcagcgtgctggacaagggtgcgcgcttttgc
gcctttgacagcatgctggcggagttctcggtgctcggcttcgagtacggctattcactc
gaggccccggacgcgctcaccatctgggaagcccagtacggcgatttcgtcaacggcgcg
caggtcatcatcgaccagttccttgtgagtggcgaggcgaagtgggaacgctcaagcggc
ctggtgctgatgctgccgcacgggtacgaggggcagggggcggaacactccagcgcccgc
atcgagcgtttcctggaacttgccgctgcgggaaacatccaggcggtctatcccaccacc
ccggcccagctcttccacgtgctgcggcgccagatgctgcaacccttccgcaagccgctg
atccttttcacgccgaagagcctgctgcgccatccggactgcgtctcccggctggaggag
ctcagctccggcagtttccgcgaagtgatcgcggagcccgccgtgggggagtcggtgcgc
caggtactgatctgcagcggcaagatctactacgatctcctggggcgcatcaggaaggac
cagttgcagggacatgcgctgttgcgtatcgagcagctctacccgcttccggtcgagcag
ttgcgggacgagttgcagcgttatcctgccggcgcccgtttcacctgggtgcaggaggag
ccgcgcaacatgggggcgtggcgcttcattcacgagtctctcatcgagcttttggggggc
gtgccgaggtacgtcggccgtcccgatgccgcagcacccgcctccggctcgcaccgcctg
gaccgcgtggagcaagagcgcatcgttgatgaagcgctgaaaatctga
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