Geomonas subterranea: KP001_19470
Help
Entry
KP001_19470 CDS
T07936
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00860
Porphyrin metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP001_19470
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
KP001_19470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B12-binding
Radical_SAM
Radical_SAM_N2
Motif
Other DBs
NCBI-ProteinID:
QXE90552
LinkDB
All DBs
Position
4465739..4467163
Genome browser
AA seq
474 aa
AA seq
DB search
MSGAKHTILLVTPPYHSGIPEIAGRWLPLGLVYLAGAARQAGVGAEIYDAMATGDGHAEI
RRRIGASAPRYVATGAMTATAAEAIAVLRTAKELDPACVTILGGGHASFMYREILAAEPA
VDFVVLGEGEQTLTHLLQTLEQGEDPAGVPGIAWHDGGAVRENTRRPLIDDLDALLPAWD
LVEWPLYSYFIIPDSRFAAISTSRGCSHQGDFCCQEQFWQGSWRGRDPQKVAREVAELHR
RHGVNVFLVTDEHPARDAARWERFLDLMIEQALPVHLIMEARAEDVIRDRDIFWKYAKAG
VAHVMLGVESAQQQMLARLGQVTAPDATGEALAIIRDHGIVSEASFFVGFPDETPESVQA
TLKEAQRCNPDNANFLPLTPWPYGSMYRELAQLIRETDFSRYNFVDPVLAPKTMSLKELQ
RGINDCYRRFYMAKMLEVMTMKDTFRRGYLVRATKLIMGSSFVIGKLNPWGSAK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagcaaagcacacgatcctcctcgttacccctccctaccacagcggcatcccc
gagatcgcggggcgctggctgccgctggggctggtgtaccttgcgggggccgcgcggcag
gccggggtcggggccgagatttacgacgccatggccacgggggacggacatgcggagatc
cggcgccgcatcggagcaagcgccccccgctatgtcgccaccggcgccatgaccgccacc
gcggcggaggccatcgcggttctgaggaccgcgaaagagctcgatcccgcctgcgtcacc
atccttgggggggggcacgcgagcttcatgtaccgggagatcctggcggcggagccggcg
gtcgatttcgtggtgctgggggagggggagcaaacgctcacccacctgcttcagaccctg
gaacagggggaggatcccgcaggcgtcccgggcatcgcctggcacgatggcggcgcggtc
cgcgaaaacacgaggcggccgctcatcgacgatctggacgcgctcctcccggcctgggac
ctggtggagtggccgctctacagctacttcatcattcccgattcccgcttcgccgccatc
agcacctcgcgcggatgcagccatcaaggggacttctgctgccaggagcagttctggcag
ggatcctggcgcgggcgcgaccctcagaaggtggcgcgggaggtggcggagctgcaccgg
cgccacggcgtcaacgtctttctcgtcaccgacgagcacccggcccgggacgcggcgcgt
tgggagcggtttctcgacctcatgatcgaacaggcccttccggtgcacctgatcatggag
gccagggccgaggacgtgatccgggatcgcgacatcttctggaagtacgccaaggcgggg
gtcgctcatgtgatgctcggcgtggagtcggcgcagcagcagatgctggcgcggctgggg
caggtgacggcgccggatgcgacaggcgaggcgcttgcgatcatccgcgatcacggcatc
gtcagcgaggcctccttcttcgtcggcttcccggatgaaacgccggaaagcgtgcaggcc
accttgaaggaggcgcagcgctgcaacccggacaacgccaacttcctgccgctgactccc
tggccatatggcagcatgtaccgcgaactggcgcagctgattcgcgaaacggacttttcc
aggtacaacttcgtcgatccggtactggcgccgaagaccatgagcctgaaggaactgcaa
aggggcatcaacgactgctaccgcaggttctatatggccaaaatgctggaagttatgacc
atgaaggacacgtttcggcgcggttacctggtgcgggcgaccaagctgatcatggggagt
tccttcgtgatcgggaagctgaatccctggggttcggccaagtag
DBGET
integrated database retrieval system
