Geomonas subterranea: KP001_19475
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Entry
KP001_19475 CDS
T07936
Name
(GenBank) radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00860
Porphyrin metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP001_19475
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
KP001_19475
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GFIT
Motif
Pfam:
Radical_SAM
B12-binding
OSTMP1
Motif
Other DBs
NCBI-ProteinID:
QXE90553
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Position
4467211..4468677
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AA seq
488 aa
AA seq
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MSKILFITAPYHCWGVQVVGTWPPLHLAYLAGAASDTGHEARIFDAMNKRLSFDDIRAEI
ERFQPDIVMTLDYLPVTGAISTATVPYALRILNIAKEICGQTVTLLGGPHPTFMYEEILE
DHGNRVDYIITGEPEQTLKKLLAALSGNGDPKAVKGIAYREGERILYTGRQPHIEDLDSL
KPAWHLLDWEDYNYLVAPYGRMASILTSRGCDMECAFCSQRMFWREDWRCRKPEKVVEEM
EHLIGDYGVSFFTLIDAYPTKHRERWELFLDLVIERKLGVHLLIETRVEDIIRDADILHK
YRDAGIIHVYLGAESADKDVLGSLNKGTSFEQNKHALDLLREAGIITEASFMIGFPTETW
DSIDNTIASAIYLNPDIAVFPVVTPMPFTPIHAQMKDRIRVFDYAKYNLVCPIIEPYQMT
MAEITQALGKCYMTFYSNKMQEIVEMEDGFKRKYLLSAFMLMMKDHGDNFDFEGADMERM
KERMKKVA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatcctcttcatcaccgcaccatatcactgctggggcgtgcaggtcgtcggt
acctggccccccctgcatttggcctaccttgccggcgccgccagcgacaccggtcacgag
gcacgcatcttcgatgcgatgaacaagcgactttccttcgacgacatcagggcggaaatc
gagcgtttccagccggatatcgtcatgaccctcgactaccttcccgtcaccggtgccatc
agcacggccaccgttccctatgcgctgcggattcttaacatcgccaaagaaatctgtggc
caaactgtaacgttattaggcggaccccatccgaccttcatgtacgaggagattctcgag
gaccacggcaaccgggtggactacatcatcaccggcgagcccgagcaaaccctcaagaag
ctcctggcggcgctctccggcaacggtgaccccaaggcggtcaaggggatcgcgtaccgg
gagggggagcgcattctctacaccggcagacagccgcacatcgaggatctggactccctg
aagcccgcctggcaccttctggactgggaagactacaactacctggtggccccctacggc
cgcatggcgtccatcctcacctcgcgcggctgcgacatggagtgcgccttctgcagccag
cgcatgttctggcgcgaggactggcgctgcagaaaacccgagaaggtggtcgaggagatg
gagcacctgatcggcgattacggcgtcagtttcttcaccttgatcgatgcctatcccacc
aagcaccgcgagcgctgggagctgttcctggacctggtcatcgaaagaaagctcggcgtc
cacctgctcatcgagacgcgggtcgaggacatcatccgcgacgccgacatcctgcacaag
taccgcgatgcggggatcatccacgtctacctgggggccgagagcgccgacaaggacgtt
ttggggagcctgaacaaggggaccagcttcgagcagaacaagcacgccctggacctgcta
agggaggcgggcatcatcaccgaggcctccttcatgatcggtttcccgaccgagacctgg
gactccatcgacaacaccatcgcgtccgccatttacctgaaccccgacatcgcggttttc
ccggtggtcaccccgatgccgttcaccccgatccatgcccagatgaaggaccggatccgc
gtcttcgactacgcgaagtacaacctggtctgccccatcatcgagccgtaccagatgacc
atggcggagatcacccaggcccttggcaagtgctatatgaccttctacagcaacaagatg
caggagatcgtcgagatggaagacggcttcaagcggaagtacctgttgagcgccttcatg
ctgatgatgaaggaccatggcgacaacttcgattttgagggcgccgacatggagcgcatg
aaggagcgcatgaaaaaggtagcctag
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