Geomonas subterranea: KP001_19550
Help
Entry
KP001_19550 CDS
T07936
Name
(GenBank) B12-binding domain-containing radical SAM protein
KO
K04034
anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:
1.21.98.3
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00860
Porphyrin metabolism
gsub01100
Metabolic pathways
gsub01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KP001_19550
Enzymes [BR:
gsub01000
]
1. Oxidoreductases
1.21 Catalysing the reaction X-H + Y-H = X-Y
1.21.98 With other, known, physiological acceptors
1.21.98.3 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase
KP001_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B12-binding
Radical_SAM
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
QXE90568
LinkDB
All DBs
Position
4497851..4499374
Genome browser
AA seq
507 aa
AA seq
DB search
MSIKRVALVTPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHKWPEIEE
RLRAFAPDVVATTSFTASIAHALELTSLAKKINPQVVTVHGNVHATFCYDEILKAEHDTV
DFVVRGEGEVTLVKLLDCLNAGGDPAAVPGLSFWRDGAVVSTPKAAPIQDLDSLPMAWDL
VEWPIYRYRAKNNARLAIVSSSRGCMEKCSFCSQQLFWERSWRARSAENFVAELELLRDS
YGVEVAMLSDEIPTFDRERWVRILDLMIERKVGVKLLMETRVDDVLRDADIMDKYREAGV
EHIYVGVEAGDQETLDLFNKNTKVEQSKAAIDIINNADIVSETSFVLGMPDDTPESIART
IELAKHYNPDMAFFLAIAPWPYAELYPELEQYVATTDYRKYNLVEPVIKPKNMTLEALER
ELGKASQKFFMHKFQNLHQLSPWKQEFMLAVFDILINNSYLAGQMRAMMKQGGEMPPEVQ
ALVRSVKGMQHGQDDAQSHPHTFAPIP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaaagagtagccttggtcacgccgccgtatcactcgggtgtcgtcgaatcg
gcggggacctggcttaacgtcggcttcgtctatatcgccggctcgctgcgtgccgcgggg
tacgaggtcgactactacgacgccatgagcctgtggcacaagtggcccgagatcgaggag
cgcctgcgcgccttcgctcccgacgtggtcgccaccacctcattcaccgcctccatcgcg
cacgccctggagctgacttcgcttgccaagaagatcaacccccaggtggtcacagttcac
ggcaacgtgcacgccaccttctgctacgacgagatcctgaaggccgagcatgacacggtc
gacttcgtggtgcgcggcgagggggaggtgacactggtcaagctccttgactgtctgaac
gccggcggcgatcccgccgccgtgccggggctctccttctggcgcgacggcgccgtggtc
tcgacacccaaggcagctccgatccaggatctcgactcccttcccatggcgtgggacctg
gtggagtggcccatctaccgctaccgcgccaagaacaacgcacgtctcgccatcgtctcc
tcgtcgcgcggctgcatggagaagtgctccttctgctcacagcagctcttctgggagcgc
tcctggcgcgcgaggagcgcggagaacttcgttgccgagctcgagcttctgcgcgacagc
tacggcgtcgaggtcgccatgctctccgacgagatcccgaccttcgaccgggagcgctgg
gtgcgcatcctggacctgatgatcgagcgcaaggtgggcgtcaagctcctcatggaaacg
cgggtggatgacgtcctgcgtgacgcggacatcatggacaagtaccgcgaggcgggggtg
gagcacatctacgtcggcgtcgaggcgggggaccaggaaaccctggacctcttcaacaag
aacaccaaggtggagcagtccaaggccgccatcgacatcatcaacaacgcggacatcgtc
tcggagacctcgttcgtcctggggatgccggacgacacgccggagagcatcgcgaggacc
atcgaactcgccaagcactacaacccggacatggccttcttcctcgccatcgccccctgg
ccctacgccgagctctaccccgagcttgagcagtacgtggcgaccaccgactaccgcaag
tacaacctggtcgagccggtgatcaagcccaagaacatgacgttggaggcgctggagcgc
gagctgggcaaggcaagccagaagttcttcatgcacaagttccagaacctgcaccagctc
tcgccgtggaagcaggagttcatgctggcggtgttcgacatcctgatcaacaactcgtac
ctggccggccagatgcgggcgatgatgaagcagggtggggagatgccgcccgaggtgcag
gcgctggtcaggagcgtgaaggggatgcagcacggacaggatgacgcgcagtcgcaccct
cacaccttcgcgccgatcccctga
DBGET
integrated database retrieval system
