Gardnerella swidsinskii: K9E37_01645
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Entry
K9E37_01645 CDS
T08402
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00750
Vitamin B6 metabolism
gsw01100
Metabolic pathways
gsw01240
Biosynthesis of cofactors
Module
gsw_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
K9E37_01645 (pdxS)
Enzymes [BR:
gsw01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
K9E37_01645 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
His_biosynth
NanE
TetR_C_27
IGPS
DUF188
Motif
Other DBs
NCBI-ProteinID:
UQA88887
LinkDB
All DBs
Position
407709..408644
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AA seq
311 aa
AA seq
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MAENLNTTVTVNESSDPQNKSGEDRTALNRQLAQMLKGGVIMDVTTPEQARIAEDSGACA
VMALERIPADIRAAGGVSRMSDPAMIHGIQEAVSIPVMAKCRIGHFVEAQVLEAIEIDYI
DESEVLSPADDVYHINKRDFAVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGDVIQAV
RHMRMMNSAIRKLTSMREDELFEEAKNLRVPFELVKYVAQNGKLPVVNFAAGGVATPADA
ALMMQLGAEGVFVGSGIFKSGDPAKRAAAIVKAVTNYKDAKMIAKLSENLGEAMVGINEQ
EIKLLMAERGE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaacttgaatactacggtaactgtgaacgaatcctcggatccgcaaaataaa
agcggcgaagaccgtacagcattgaaccgccaattggcgcaaatgcttaagggtggcgta
attatggacgtcaccaccccagagcaggcgcgaattgctgaagattctggcgcatgcgca
gttatggctttggagcgtattcctgccgatattcgtgcagcaggcggcgtttctcgtatg
agcgacccggctatgatccacggcattcaagaggctgtgtctattcctgttatggcaaaa
tgccgtatcggtcactttgttgaagcacaagtgcttgaggctatcgagatcgactacatc
gacgaaagcgaagtgctttctccagccgacgacgtgtatcacatcaataagcgcgatttt
gctgtgcctttcgtttgcggcgctaaggatttgggtgaagctttgcgcagaatcaacgaa
ggcgcttccatgattcgcactaagggcgagccaggaactggagacgtgattcaagctgtg
cgtcacatgcgcatgatgaattccgcaattcgtaagcttacaagcatgcgcgaggatgag
ctttttgaagaagccaaaaatttgcgcgtgcctttcgaactcgtaaaatacgttgcacaa
aacggcaagctccctgttgttaacttcgcagccggcggcgttgctaccccagccgacgct
gctttaatgatgcagcttggtgccgaaggcgtattcgttggctccggtatctttaagtct
ggagacccagcaaagcgtgctgcagcaatcgttaaagctgtaactaattacaaggacgcc
aagatgattgctaagctttccgaaaacttgggcgaagctatggttggcattaacgagcag
gaaatcaagcttttaatggctgagcgaggcgagtaa
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