Geovibrio thiophilus: EP073_00750
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Entry
EP073_00750 CDS
T05803
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gtl
Geovibrio thiophilus
Brite
KEGG Orthology (KO) [BR:
gtl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gtl03009
]
EP073_00750 (rimO)
Enzymes [BR:
gtl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EP073_00750 (rimO)
Ribosome biogenesis [BR:
gtl03009
]
Prokaryotic type
ribosomal protein modification factors
EP073_00750 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
DUF2179
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QAR31979
UniProt:
A0A410JVC8
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All DBs
Position
161880..163187
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AA seq
435 aa
AA seq
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MKISYISLGCSKNKVDLEYLMGSLQEGGHEISLEMADADAIIINTCGFIEPAVNEAVEAV
LEAAQVKKPDAKLIVTGCMTERFKNDVAGELPEIDFHTGVGKMSDVIAYLEGVEPVRKER
DFLYGGARVLTGVPFSAYIKISEGCNNRCTYCTIPSIRGNLTGRRIEDIVNEITALKDQG
VKEFVLVSQDNTKYGTDIYKKPMLCRLLREIDKIGGDFYVRIMYLNPDGVTEELVKLVKN
SEKILSYYDIPVQHINKRVLKDMHRKSTPDGIKHVFSMIREIDPEAFIRTTMIVGFPGET
DEEFAELLEFVKEYKPDYAGFFPFYPEEGTKATAMGMRVDGRTVRGRIGALRKAQIKNTR
ERLKKVKKNDIICFAEKPNDEFGFLMEGRALFQAPEVDGKVLFTDSEAISGYGPYVCRIE
KISYPDIVCEVIRPL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttcttacataagtttaggatgctcaaaaaacaaagtcgatcttgagtatctc
atgggttcgcttcaggaaggcgggcatgagataagccttgagatggccgacgcggacgcg
ataataatcaacacatgcggatttattgaacctgcggtgaacgaggctgtggaggctgtg
cttgaggcggcgcaggtgaaaaagcctgatgcgaagctgatagtcaccggctgcatgaca
gagagattcaagaacgatgtggcaggcgagctgccggagatagattttcatacgggcgta
ggcaaaatgagcgatgtcatagcctatctggaaggggtcgagcctgtgaggaaggagcgt
gatttcctttacggcggcgcgcgcgtactcaccggagtgcccttcagcgcatacatcaaa
atatccgaagggtgcaacaaccgctgcacatactgcaccatcccctccatcagaggaaac
cttaccggaaggcgcattgaggacatagtgaacgagataaccgccctgaaggatcaggga
gtcaaggagtttgtgcttgtttctcaggataataccaaatacggaacagatatttacaaa
aagccgatgctttgcaggcttctgcgggagatagataaaatcgggggcgacttctacgtg
aggatcatgtacctcaaccccgacggagtgacggaggaacttgtaaaactcgtcaaaaac
tcagagaagattctaagctactacgatattccggttcagcacatcaataaacgtgtgctg
aaggatatgcacaggaaatccacaccggacggcataaaacatgttttcagcatgataagg
gaaatcgatcctgaagcgttcatccgtacgacaatgatagtcggcttccccggggaaaca
gatgaggagttcgcagaactccttgaatttgtgaaggagtacaagccggattatgcaggc
ttcttcccgttctaccccgaggaaggcacaaaagccaccgcgatgggcatgagggtggac
ggcaggacggttcggggaaggatcggcgcgctccgtaaggcgcagataaaaaacacccgt
gaacgcttgaaaaaagttaagaaaaatgacatcatctgctttgccgaaaagcctaacgat
gagttcgggtttctgatggaaggaagagccctgtttcaggctccggaggtggacgggaaa
gtcctcttcaccgattccgaagcgatcagcggctatggtccgtatgtctgccggatagaa
aaaataagctatccggatatagtgtgcgaggtcataagaccgctttaa
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