Geobacillus thermocatenulatus: GT3921_05780
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Entry
GT3921_05780 CDS
T05178
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gtm
Geobacillus thermocatenulatus
Pathway
gtm03030
DNA replication
gtm03410
Base excision repair
gtm03420
Nucleotide excision repair
gtm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT3921_05780
03410 Base excision repair
GT3921_05780
03420 Nucleotide excision repair
GT3921_05780
03440 Homologous recombination
GT3921_05780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gtm03032
]
GT3921_05780
03400 DNA repair and recombination proteins [BR:
gtm03400
]
GT3921_05780
Enzymes [BR:
gtm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GT3921_05780
DNA replication proteins [BR:
gtm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GT3921_05780
DNA repair and recombination proteins [BR:
gtm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GT3921_05780
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT3921_05780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Enkurin
HHH_2
XPG_I
Motif
Other DBs
NCBI-ProteinID:
ASS98587
LinkDB
All DBs
Position
1166136..1168772
Genome browser
AA seq
878 aa
AA seq
DB search
MRLKKKLVLIDGSSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEEPTHMLVAF
DAGKTTFRHEAFQEYKGGRQQTPPELSEQFPLLRELLRAYRIPAYELENYEADDIIGTLA
ARAEQEGFEVKVISGDRDLTQLASPHVTVDITKKGITDIEPYTPETVREKYGLTPEQIVD
LKGLMGDKSDNIPGVPGIGEKTAVRLLRQFGTVENVLASIDEIKGEKLKETLRQHREMAL
LSKKLAAIRRDAPVELSLDDIAYQGEDREKVVALFKELGFQSFLEKMESPSSEREKPLAK
MAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFV
AWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKR
YEEVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWALERPFLDELSRNEQDRLLVELE
QPLSSILAEMEFAGVKVDTKRLEQMGEELAEQLRTVEQRIYELAGQEFNINSPKQLGVIL
FEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPD
TKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIE
LRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNFGIVYGISD
YGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQARLLLQVHDELILEAPK
EEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagattgaaaaaaaagcttgttttaatcgacggcagcagcgtggcgtaccgcgccttt
tttgccttgccgcttttgcataacgacaaaggcatccatacgaacgccgtctacgggttt
acgatgatgttgaataaaattttggcggaagaagagccaactcatatgcttgtcgcgttt
gacgccgggaaaacgacgttccggcatgaagcgtttcaagagtataaaggtgggcgccag
cagacgccaccggagctgtcggagcagtttccgctgttgcgcgagctgctgagggcgtat
cgcatccccgcctatgaactcgagaactacgaagcggacgatattatcggaacgcttgcc
gcccgcgctgagcaggaagggtttgaggtgaaagtcatttccggcgaccgcgatctgacc
cagctcgcctccccccatgtgacggtggacattacgaaaaaagggattaccgatatcgaa
ccatacacgccggagacggtccgcgaaaaatacggcttaactccggaacaaatcgttgat
ttgaaaggattgatgggcgacaaatcggacaacatccccggagtgccgggcatcggggaa
aagacggcggtcaggctgctcaggcaattcggcacggtcgaaaatgtgcttgcctccatt
gacgagatcaaaggcgaaaagttgaaagaaacgctgcgccaacaccgggagatggcgctg
ttaagcaaaaagctcgccgccattcgccgcgacgccccggtcgagctctcgcttgatgac
atcgcctatcaaggggaagaccgggagaaagtggtcgctttatttaaagagcttgggttt
caatcgtttttagagaaaatggaatcgccgtcatcagaaagggaaaaaccgcttgccaag
atggcatttacgcttgctgaccgcgtgacggaagagatgcttgccgacaaggcggcgctt
gttgttgaagtggtcgaggaaaattatcatgatgcgccgatcgtcggtatcgctgtggtc
aacgaacatggacggtttttcctgcgcccggagacggcgcttgccgatccgcagtttgtc
gcctggcttggtgatgaaacgaagaaaaaaagcatgtttgactcaaagcgcgcggcagtc
gccttgaaatggaaaggaattgagctatgcggcgtttcctttgatttattgctggctgcc
tatttgcttgatccggcgcaaggtgttgatgatgtggctgccgcagccaaaatgaagcga
tacgaagaggtgcgcccggatgaagcggtgtatggcaaaggggcgaagcgggccgtgccg
gatgagccagtgctcgccgagcatctcgtccgcaaggcggcggcgatttgggcgctcgaa
cggccgtttttggatgagcttagccgcaacgaacaagatcggttgctcgtcgagctcgag
cagccgttgtcttcgattttggcggaaatggaatttgccggagtgaaagtggatacgaag
cggctcgaacagatgggcgaagagctcgccgagcagctgcgcacggtcgagcagcgcatt
tatgagctcgccggccaagaattcaacatcaattcgccgaaacagctcggcgtcatttta
tttgaaaaactgcagctgcccgtcttgaaaaaaacgaaaaccggctactccacttcggcg
gatgtgcttgaaaaacttgcgccttatcacgagatcgtggaaaacattttgcattaccgc
cagcttggcaagttgcagtcgacgtatattgaaggattgctgaaagtcgtgcgacccgat
acaaagaaggtgcatacgattttcaatcaggcgttgacgcaaaccggacggctcagctcg
acggagccgaacttgcaaaacattccgattcggcttgaggaaggacggaaaatccgccaa
gcgttcgtgccgtcggagtctgattggctcattttcgccgccgactactcacaaattgag
ttgcgcgtcctcgcccatattgcggaagatgacaatttaatggaagcgttccgccgcgat
ttggatatccatacgaaaacagcgatggacattttccaagtgagcgaggacgaagtgacg
cccaacatgcgccgtcaggcgaaggcggtcaactttgggatcgtttacgggatcagtgat
tacggcttggcgcaaaacttaaatatttcgcgcaaagaggcggctgaattcatcgagcgc
tacttcgaaagcttccctggcgtgaagcggtatatggaaaacattgtgcaagaagcaaaa
cagaaagggtatgtgacgacgttgctgcatcggcgccgctatttgccggatatcacgagc
cgcaacttcaacgtccgcagttttgctgaacggatggcgatgaacacgccgattcaaggg
agcgccgctgacattattaaaaaggcgatgatcgatctgaacgccagactgaaggaagag
cggctgcaagcgcgccttttgctgcaggtgcatgacgagctcattttggaggcgccgaaa
gaagagatggagcggctgtgccggctcgttccggaagtgatggagcaagcggtcacactt
cgcgtgccgctcaaagtcgattaccattatggctcgacgtggtatgacgcgaaataa
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