Geobacillus thermodenitrificans: GTNG_3335
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Entry
GTNG_3335 CDS
T00496
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
gtn
Geobacillus thermodenitrificans
Pathway
gtn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gtn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GTNG_3335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtn03021
]
GTNG_3335
03400 DNA repair and recombination proteins [BR:
gtn03400
]
GTNG_3335
Transcription machinery [BR:
gtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GTNG_3335
DNA repair and recombination proteins [BR:
gtn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GTNG_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ABO68674
UniProt:
A4ITM0
LinkDB
All DBs
Position
complement(3440694..3441251)
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AA seq
185 aa
AA seq
DB search
MSLQQQYSPEELQEMSFVELANLILLNKREALPFDQIVREAAALTGATEDDIAARLAQYY
TDLNIDGRFICVGENVWGLRAWYPFDQTEDETVTIVKPKKKKKVLDDEYDDYEELLDEED
LDYDDLDEYDDEELEVDDEELLEDEEFDLDEDVDFEDDVLDDEEFELDEEPLDEDLDLEE
TEEDE
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctgcagcagcaatactcgccagaggaattgcaggagatgtcgttcgtcgagttg
gcgaacctcattttgcttaataagcgggaggcgctgccgtttgaccaaatcgtccgtgaa
gcagcggcattgaccggcgcaacggaggacgacatcgccgcgcggcttgcccagtattac
actgatttaaacatcgacggacggtttatttgcgtcggggaaaacgtctgggggctgcgc
gcatggtatccgtttgaccagaccgaagacgaaacggtgacgattgtcaagccgaagaag
aagaaaaaagtgcttgatgacgaatacgacgattacgaagagttgcttgacgaagaagat
cttgattatgacgatctcgatgaatacgatgacgaagagcttgaggtcgacgacgaagag
ctgcttgaagatgaggagttcgaccttgacgaagatgtcgattttgaagacgacgtgctc
gatgacgaagagtttgaactggacgaagagccgcttgacgaagatctcgatctcgaggag
acagaggaagacgaataa
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