KEGG   Gloeophyllum trabeum: GLOTRDRAFT_80865
Entry
GLOTRDRAFT_80865  CDS       T03130                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03020  RNA polymerase
gtr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GLOTRDRAFT_80865
  09124 Replication and repair
   03420 Nucleotide excision repair
    GLOTRDRAFT_80865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtr03021]
    GLOTRDRAFT_80865
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_80865
Transcription machinery [BR:gtr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     GLOTRDRAFT_80865
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      GLOTRDRAFT_80865
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Lar_restr_allev Zn_Tnp_IS1 Zn_Tnp_IS1595 C1_1 Elf1
Other DBs
NCBI-GeneID: 19309019
NCBI-ProteinID: XP_007869750
JGI: Glotr1_1_80865
UniProt: S7PW64
LinkDB
Position
Unknown
AA seq 128 aa
MASLHFCSECNNLLYPKADSARRVMVYACRICAYDEVGENQCVYRNDLLTVTKEKVGVTT
DLGSDPTLAHSNISCPRCGNEDAVFFQDQSKRKETRMILFFVCTKCDHSFMDPSVSTESR
PEDMDTQV
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcctcattacacttctgctcagaatgcaataaccttctgtacccgaaggcggattct
gctcggagagttatggtttatgcatgtcgcatttgcgcctatgacgaggttggggagaac
cagtgcgtgtacaggaatgatttgctgacggtgacaaaagagaaagtcggcgtcaccacg
gatctaggatctgaccccaccctggcgcacagcaacatctcatgccctcgctgtggaaac
gaggatgcggtcttcttccaagaccaatcgaaacgaaaggagacacgtatgatcctcttc
ttcgtgtgtacaaaatgcgaccacagttttatggatccgagcgtctcgacggagagtcga
ccggaagatatggatactcaggtttag

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