Guillardia theta: GUITHDRAFT_100722
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Entry
GUITHDRAFT_100722 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gtt
Guillardia theta
Pathway
gtt03020
RNA polymerase
gtt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GUITHDRAFT_100722
09124 Replication and repair
03420 Nucleotide excision repair
GUITHDRAFT_100722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtt03021
]
GUITHDRAFT_100722
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_100722
Transcription machinery [BR:
gtt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
GUITHDRAFT_100722
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
GUITHDRAFT_100722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
17310251
NCBI-ProteinID:
XP_005840731
JGI:
Guith1_100722
UniProt:
L1JYV0
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MASTRTPLIEVNFLDDYNINFVLSNTDVSIANALRKAIISEVPTIAIDLVEIEENSSVLA
DEFIAHRLGLIPLVSTRAMHADGPVPFRDVEGNITSFLWHHEASDDKDCEIKFELEVRNT
EDNPMEVRLILIRLLEVLRHGGGVKPVEYDPEYPVVIAKLKRNQAIKLTAIAKKGVGKMH
SKWSPASGVYFTYEPVVTINYERMEGLSAQQRKTWVEACPPGILRFNEMTGQVEVEDEIN
NGIAFSGECEKVAKELFGYDFYDLIVIKPKSGSDGYPDRFNFFVETNGALDPVTLVRAAI
WELVRKVQNIEESLRTGEM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagaactccgttgatcgaggtcaattttctcgatgactacaacatcaac
ttcgtcctcagcaacacggacgtgagcatagccaatgcccttcgcaaagccatcatctcc
gaagttccaaccatcgccatagacttagtggagatagaagagaattcttcggtgctggcc
gacgagttcatcgcccatcgcctggggttgatccccctggtgtcgacgagagcgatgcac
gcggatggccccgtgcctttcagagatgttgaaggcaacataacatccttcctttggcat
catgaggcatcagacgacaaagattgcgaaataaagtttgagctcgaggtcaggaacacc
gaagacaacccgatggaggtgagattgatcctcatccgcctcttggaggttctgagacac
ggcggaggagtgaagcccgttgagtatgaccccgagtatcctgttgtgatcgcgaagctg
aagcgaaatcaagccatcaagcttacagcaattgcaaagaagggggtcggtaagatgcac
agcaagtggtcgcctgccagtggcgtctacttcacctacgagccagttgtcaccatcaac
tacgagaggatggagggactatcagcccagcagcgcaagacttgggtagaagcatgtccg
ccggggatcttgaggttcaacgagatgacaggacaggtggaagttgaggatgaaatcaac
aatggtatcgccttcagcggagagtgcgagaaagtcgccaaggagttgttcggttatgac
ttctacgacttgatcgtcatcaagcccaagagcggctccgatggataccccgacaggttc
aacttcttcgtggagactaacggagcgctggacccggtgacgcttgtgcgagcggcgata
tgggagttggtccgcaaggttcagaatatcgaagagtctctaagaacaggagagatgtag
DBGET
integrated database retrieval system
