Guillardia theta: GUITHDRAFT_111516
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Entry
GUITHDRAFT_111516 CDS
T02925
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gtt
Guillardia theta
Pathway
gtt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GUITHDRAFT_111516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_111516
Enzymes [BR:
gtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GUITHDRAFT_111516
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
GUITHDRAFT_111516
FA (Fanconi anemia) pathway
Downstream FA components
GUITHDRAFT_111516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
YceM-like_C
Motif
Other DBs
NCBI-GeneID:
17299145
NCBI-ProteinID:
XP_005829521
JGI:
Guith1_111516
UniProt:
L1J1Z3
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MTTMASQEVSRALHIRGCEVNFPHTPYSSQLAMMDKTIFALRNEKNVLLELPTGSGKSLS
LLCAVSAWLQAAEREQQQQGQLRPEGDNDLNGLHGMDPMHDDDDDMDEDEDEDEDEDEDV
GGAAGGNEGDVNDVRQEDKDRKARRKSRRSPKIYFASRTHSQIAQLVRELRKTKYSPRIC
VLGSREHYCINPRVMASEKPKGEECKAKLKENSCSFYHGVQRLENHKDLQPHGKLRLHDI
EGRDRPPKVHGCPYFAARSLAKRANVIFCPYNYLVEPAIRDAMGVELEGNTVIIDEAHNI
EDVCREAASLELKHEDLVETNRQWEEMQFAEDAHNYMLLDAVVRNLASYMKEQSQNLIQQ
NHLYSYKIQSGFIATDVFRNAGINEETLKPLNSFLQKAIKKLDEVENQREEESSPLPPAK
SLKLVQDIFSKAQLLFQNPFDYRLAIEQRTTREERGGRRPGQAKLELSMSLWCLNPAVAF
KAVSSQTRAVILTSGTLSPITSFATELGTTFHMTYQAPHVIDTSKQVFVGSVCSVPGNPL
LKLNGSYKHQDSVIYQDNLGAAVLELCKIIPFGVLCFFPSYGLLEKVKSRWMATGQYEKI
DEVKDIIVEPRTGEDFDRAMESYYDAIARSKGEAAPKATKKAASKSFFKKAGQKVPTPGK
AKTGAVFLAVCRGKVKVKKTYNDNKVGDGLLNGDEWYSLQAFRAINQAVGRCIRHVNDYG
SIIFLDERYQQKSSIKSNLSKWVRECLVDYKTFEDCAGRLGGFFSQLAPADVEQLKERLE
KSEPSCKASGTKTSNKCMTFEFAAASLLDALNPESSEPPPALGANSAEPGGTSAGDALCV
LGGQDDPCCKEPPEACGGCADIEKETASFLSCCGQEVDVDFCLEEVKETVQHHSVRELTR
AADDKGGSFYCIDVERSCNFVKGSLHAARPSEGPEGTWFPQDGLVLSKVFCKHCSAEMGA
QVLAATRENVDRIGKVLIPAERLYQGERGGKTRIKASHEVEQSKSSMLLSYFTSKSCKEK
KGSAFQQSCYGASMVGKARGSERAEEKENVMIIDCDVGQAASQQEVSKSRSEQTRSVQRF
MDSAEAFDDDDDFRPSRPKGAAMKSKKKPRTDGRF
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatggcgagtcaggaggtatcaagggccttgcacatccgagggtgcgaggtg
aactttcctcacactccatactcttcacagctggcgatgatggataagaccattttcgca
ctgaggaacgagaagaacgtgctgcttgaattgccaacaggatctgggaagagccttagc
ctcctgtgcgcagtctcagcatggctgcaagctgcagagagggagcagcagcagcaggga
cagctcagacccgaaggcgacaatgatctcaatggcctccatggcatggatcctatgcat
gatgacgacgacgacatggatgaggatgaggatgaggatgaggatgaggatgaggatgtt
ggtggagctgctggcggtaacgaaggcgatgtcaatgatgtaaggcaggaagacaaggac
agaaaggctcgtagaaaatctcgtcgctccccgaagatctactttgccagcagaactcac
tcgcagatagcacagctggtacgcgagctgaggaagacgaagtattcaccaaggatatgc
gtgttgggatcccgtgagcactactgcatcaaccctcgagtgatggcgtcggagaaaccc
aagggagaagaatgcaaggcgaagttgaaagagaacagctgctcgttctaccatggcgtc
cagaggctggagaaccacaaggacctgcagccccatgggaagttgagactccacgacatc
gaaggcagagatcgacctcctaaggttcacggatgcccatacttcgccgcgagatctctt
gcgaaacgagccaacgtaatcttctgcccgtacaactacctggtggagccagcgatacgc
gacgccatgggggtcgagttggaggggaacacagtgatcatcgacgaggctcacaacatc
gaagacgtgtgtagggaggcagcaagccttgagctgaagcatgaagatcttgttgaaacg
aatagacagtgggaggagatgcagtttgccgaagatgcacataactacatgttgctggat
gcagttgtccgaaacctagcaagctacatgaaggagcaaagtcagaatctgattcaacag
aaccatctctactcttacaagatccaaagcgggtttattgctacagatgtttttcggaac
gcgggaatcaacgaagagactttgaaacctttgaactcttttcttcagaaagcgatcaag
aaactggacgaggtggagaatcagagagaagaagaatcaagtcccttgcccccagccaag
tctctcaagctcgttcaggacattttctccaaggcccagctgttgttccagaacccgttt
gactacagacttgctatcgagcaacgaactacgagggaggagcgaggggggagaaggccg
ggccaagccaagttagagctgagcatgagcctttggtgcctcaaccctgctgtggctttc
aaggccgtctcctctcaaaccagggctgtcatcctcacgagtggaacgctctcccccatc
acgtcgtttgcaacggagctgggcacgacctttcacatgacgtaccaggctccccacgtt
atagacaccagcaaacaggtcttcgtgggcagtgtctgcagtgtgcccgggaaccccctc
ctgaagctcaacgggagctacaaacatcaggactcggtgatctaccaagacaaccttggg
gctgcagtccttgagctgtgtaagatcattcctttcggggttctctgtttcttcccctcc
tacgggttgttggagaaggtcaagagccgctggatggcgactggtcaatatgaaaagatt
gacgaagtcaaagatatcatagtagagcctcgcactggcgaagacttcgatcgagccatg
gagagctactatgatgcaattgcaaggagcaaaggagaggcagctccgaaagccaccaag
aaggcagcgtctaagagcttcttcaagaaggccgggcagaaagttccaacacccggcaag
gccaagaccggggcagtcttcctagctgtctgcagagggaaggtgaaggtgaagaagacg
tataacgacaacaaagttggcgatggcttgctgaacggagacgagtggtactccctacaa
gcgttcagagctatcaaccaggcagtcgggcgttgcatccggcatgtgaacgactacggt
tcgatcatcttcctcgatgaaaggtaccagcagaagtccagcatcaagtcaaacctgtcc
aagtgggttcgggagtgcctagtggactacaagacgtttgaggactgcgcgggaaggctg
ggaggcttcttctctcaacttgcgcctgccgatgtggagcagctgaaggagaggctggag
aagtcggagccgagctgcaaggccagcggcaccaagacgagcaacaagtgcatgacattc
gagtttgctgccgcgtccttgctcgatgccctgaacccagagtcatctgaacccccaccc
gcattgggagcgaactctgcagagcctggaggtacttcagcaggagatgctctgtgtgtg
ctaggagggcaggacgatccttgttgcaaggagcctccagaggcctgcggaggctgtgct
gacatagagaaggagactgcgagtttcctgtcatgttgcggccaagaagtcgacgttgac
ttctgtctcgaggaagtcaaagagacagtccagcatcacagcgtcagggagctgacgcga
gctgccgatgacaagggcggctccttctactgcatcgacgtagaacgatcctgcaacttc
gtcaagggcagtctacatgctgcaagaccctcggaaggccctgaaggcacctggttccct
caagacggacttgtgctctccaaagtcttctgcaaacactgcagcgctgagatgggggcg
caagtcttggcggctacgagggagaacgtggacaggataggcaaggtcttgataccagca
gagaggctgtaccaaggggagaggggaggaaagacaaggattaaggcgtcgcatgaggtg
gaacaatccaagagctccatgctgctgtcctacttcacgtcgaagtcgtgcaaggagaag
aaaggctcggccttccagcagagctgctatggtgcatcgatggtcggcaaggcaagggga
agtgagagggcggaggagaaggagaacgtcatgattatcgactgcgatgtgggtcaagca
gcttcccagcaggaggtgagcaagagcaggagtgagcaaaccaggagtgtgcagaggttc
atggacagcgccgaagccttcgacgatgacgatgacttccgtccttcaagacccaaggga
gctgccatgaagagcaagaagaagccaaggactgacgggagattctag
DBGET
integrated database retrieval system
