Guillardia theta: GUITHDRAFT_99983
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Entry
GUITHDRAFT_99983 CDS
T02925
Symbol
Msh6
Name
(RefSeq) Msh6 mismatch repair muts-like protein, meiosis and mitosis
KO
K08737
DNA mismatch repair protein MSH6
Organism
gtt
Guillardia theta
Pathway
gtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GUITHDRAFT_99983 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gtt03400
]
GUITHDRAFT_99983 (Msh6)
DNA repair and recombination proteins [BR:
gtt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
GUITHDRAFT_99983 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
PTM_DIR17_Tudor
LBR_tudor
MutS_IV
Motif
Other DBs
NCBI-GeneID:
17311025
NCBI-ProteinID:
XP_005841484
JGI:
Guith1_99983
UniProt:
L1K1Q1
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
MLRQASIKSFFTAKSDCSPSPQPDLHANSTLNASQADVAPSSKSSGCSPSQVKKCATQSS
LLSPTASRRSPDTASSEAKTDKKSKKCTDALMEQGTCKHLEPLLTEGERIPPAIGCLVKV
LFDEGDWYQGKITRYDRASQLWHVQFEDGDEDDVRIPSEDVMVLQQAEENAERDVPKTRR
STRSCSTKAMRVEKKYTFDPSSSESESDEKDRQTKRRRIRRVVESDNSEGEDRSYEVPQA
NSMEEEEDSSSDEETEAQDVRSSEAADESMEVEDSPKKKQPVVNKSQTKGSRTSSGSVGS
LKSLILPASKASGKERSAPTAGSSRSKKQIDLSPSEERRLARETKFEAINQERYKWLEDV
KDSSGKRPGEDGYDPRTLYIPSSAYSSFTQFERQFWDIKRENFDVVLFFKKGKFYEMFEG
DADIGHKHLHLKLTDRVKMRMCGIPEGQFSTYATRLVARGFKVGRVEQMETLNAMQKRAK
SNGVKQGSLVCERELCQILTQGTLVDESMLSSPQANYMLTVSVESQSSTHMGICLLEAST
GYFYLGEVEDDEMRTQFETVLLKAKPKEVVYPKGCLNKICLNMIRRHLDNPILNALQPGE
QFWDHQRTVTELENGSYFSSPTEDVDSSHGNSSKGLPEQLNQMVSERKESALSALGGAVC
YLRSLKLDMELVSMKNFRPLQEFDGSSKSSLIIDGQTLCNLEVIENCSGGTEGTLLKFLD
RCSTAFGKRKFRNWVCSPLQDVSAINLRLDAAEFFSSSSVRKEIQAKLKKLPDVERHLSR
VHMHGTARKQGVMFDDTSARKLRLFLQLLESLDVVCEIAELVQGLKEDGDESGSRAAPRL
PHVDFPQDLRGTLSKFKGSYGDLRKAMEDGFITPESGVYQDYDKAMDRLKGIEKFFEDEL
LVRPVSLYLVPSNGKSQGWKKKLGEPSLRFWHPAAGREPYQIEFPSSFFEERNKKLSNDF
ELKSQTSKVKRYWTDSIREKVSELVDARETLDEIRSGMSRRMQIDFDSNYNVWSQAVEAC
AHLDCLISLSYTCEEELRDCRHPCISAMARQTFVPNDVVLGAVACSDGFQRACVVTGPNM
GGKSTLLRQTCIAVIMAQVLPPLALPPPPDRRAKMGAYVPAACCRMRPVDRIFTRIGASD
RIMAGQSTFMVELSETSIILQNATSRSLVILDELGRGTSTFDGYAIAYSVLCHLVKQNRP
LLLFSTHYKSITDEFRASKDVSLCHMDCLVDEGSQTVTFLYKFKRGVASDSYGLHCAKAA
GLPQAVIARAQACKSSLETRGSLRGLRQLSLFKSVIELADNQELPRHLDLEELVGDVKES
LG
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaagcctccatcaagtcattcttcacggcgaagagcgattgttctccatct
cctcagccggacttgcatgccaacagcacgttgaacgccagccaggctgacgtcgcgcca
tcgtcgaaatcgtcaggatgctccccgtcgcaggtgaagaagtgtgcgactcaatcctcc
cttctctccccgacagcaagccgacgctcccccgacacggcctcatcggaggccaagaca
gacaaaaaatcaaagaagtgcaccgacgcactcatggaacagggaacttgtaagcacctc
gagcccctcctgacagaaggagagcgcatcccccccgccatcggatgcctggtcaaggtt
ttgttcgatgagggcgactggtaccaaggcaaaatcacccgctatgacagagcgtcacag
ttgtggcacgtgcaattcgaggatggcgacgaggatgatgtaaggatcccttcggaagat
gtgatggtcctgcagcaagcggaggagaacgctgaacgtgacgtgccgaagacgaggaga
agcaccagatcttgctcaacgaaagcgatgagggtcgagaagaagtacacgttcgatccc
agcagctcggaatcggaatcggatgaaaaggataggcaaacaaagaggaggagaatcagg
agggtggtagagagcgataactcagagggtgaggacagatcctatgaggtcccgcaagca
aatagcatggaggaagaggaggattcttcgtcagatgaagaaactgaagctcaggatgtg
agaagcagcgaggcggccgacgagagcatggaggtcgaagacagcccgaagaaaaagcaa
ccggttgtcaacaagagccagacgaaaggaagcagaacttcctctggtagcgttggaagt
ctgaaatctttgattctccccgcctccaaagcctcgggaaaagagaggagtgctccaacc
gctggtagctctcgaagcaagaagcagattgatctctctccctccgaggaaagaaggcta
gctcgtgaaacaaaattcgaagcgatcaatcaggaacgttacaaatggctcgaggatgtg
aaagattctagtggcaagaggcctggagaggacggatacgaccctcggaccctctacatc
ccaagctcggcctactcctcattcactcaattcgagagacagttctgggacatcaagagg
gagaactttgatgtagtgctcttcttcaagaaagggaaattctacgagatgtttgagggt
gacgccgacattgggcacaagcacttgcacctcaagcttacagatcgcgtgaagatgcgc
atgtgcggcatacctgaaggacagttctccacctacgccacgcgcctcgtggcaagaggc
ttcaaggtaggcagagtcgagcagatggagacgttgaatgcgatgcaaaagcgagcgaag
agcaatggggtgaagcaagggtctctggtctgtgagagagagctctgtcagatcctcact
caaggcactttagtcgatgagagcatgctgagctccccgcaggcaaactacatgctgacc
gtaagtgtcgagagccaatccagcactcacatgggcatctgcttgctcgaggcttccacc
ggatatttttacctcggcgaggttgaagatgatgagatgcgaactcaattcgagaccgtc
ttgctgaaggcgaagccaaaggaagtcgtctaccccaagggctgtctgaacaaaatctgc
cttaacatgatccgaagacatctcgacaatcccatcctgaacgctttgcaacctggtgaa
cagttctgggaccaccagcggaccgtcactgaactagagaacggatcgtacttctcttct
cccactgaggatgtcgattcttctcatggaaactcaagcaaggggcttcctgagcagctc
aatcagatggtgtcggagagaaaggagtctgcattgtcggctctcggaggggcagtgtgc
tacctgcgctctctgaagctggacatggagctcgtctccatgaagaacttccggcccctc
caggagttcgatggctccagcaagtcttctctcatcatcgatgggcagaccctgtgcaac
ctcgaggtcatcgagaactgcagcggagggacggagggaacgctgctgaagttcttggat
cgctgctccaccgccttcgggaagcggaagttccgcaactgggtctgctcgccactgcag
gacgtcagcgccatcaacctgcggctcgatgctgctgagttcttctcctcttcatccgtg
aggaaggaaattcaggcgaagctgaagaagctgccggatgtggagaggcacctgtcgagg
gtgcacatgcatgggactgcacggaagcaaggagtcatgttcgacgacacttccgcccgc
aagctccgcctcttcctccagctgctcgaatccttggacgtcgtgtgcgagatcgctgag
cttgtgcagggcctcaaggaggacggggatgagagcgggtcacgggctgctccccgtctg
ccccacgtcgacttcccgcaggatctccgagggacattgtcgaagttcaagggatcttac
ggcgatctccgcaaggcgatggaggacgggttcatcacccccgagagtggggtctatcaa
gattacgacaaggccatggaccgactgaaggggatcgagaaattcttcgaggacgagctg
ctggttcgccccgtctcactttatctggttccctctaacggcaagtcccaggggtggaaa
aagaagctcggggagccctcgttgagattctggcacccggcagcggggcgagagccgtac
cagatcgaattcccctccagcttcttcgaggagaggaacaagaagctgtccaatgacttc
gagttgaagtcgcaaaccagcaaggtgaagagatattggacggactccatcagagagaag
gtgtcggagctcgtcgatgccagggagaccttggacgagataaggtcggggatgtcgagg
aggatgcaaattgacttcgactcaaactacaacgtgtggtctcaggcggtggaagcctgc
gcgcatctggactgtctgatcagcctgagctacacgtgcgaggaggagctgcgggactgt
cgccatccgtgcatcagcgccatggcgcgacagactttcgtccccaacgatgttgtgctc
ggagcagtagcctgctccgacggattccagagggcgtgtgttgtgacggggccgaacatg
ggggggaagtcgacgctgcttcgacagacgtgcatcgcggtcatcatggcgcaggttctg
cctcctcttgccctccctccccctcctgaccgtagggcaaagatgggagcgtacgtgccg
gctgcttgctgcaggatgcgaccggtcgacaggatcttcacgaggatcggagccagcgat
cgcatcatggcgggacagtcgacgttcatggtcgagctgagtgaaacctctatcatcctc
cagaacgccacatcgaggtctctcgtcatccttgacgagctcgggagaggaacgagcacc
tttgacggctacgccatcgcctactccgtcctctgccacctcgtcaaacagaaccgtcct
ctcctgctcttctctactcactacaagagcatcaccgatgagttccgagcaagcaaggac
gtgagtttgtgtcacatggattgcttggtcgacgaagggagccagaccgtcaccttcctc
tacaagttcaagaggggtgtcgccagtgacagctacgggctccactgtgcaaaagcagca
ggtctgccgcaggcagtgatcgctcgagctcaagcctgcaagtccagcctggagacccgc
gggagccttcgaggactacggcagctctccctcttcaagtcggtcatcgagctcgcggac
aaccaagagctgccgcgacatctcgacctggaggagcttgtgggagacgtgaaggaatct
cttggatag
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