KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0120
Entry
HMPREF0424_0120   CDS       T01146                                 
Name
(GenBank) type II/IV secretion system protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gva00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HMPREF0424_0120
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gva02044]
    HMPREF0424_0120
   02035 Bacterial motility proteins [BR:gva02035]
    HMPREF0424_0120
Enzymes [BR:gva01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HMPREF0424_0120
Secretion system [BR:gva02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   HMPREF0424_0120
Bacterial motility proteins [BR:gva02035]
 Pilus system
  Pilus assembly proteins
   HMPREF0424_0120
SSDB
Motif
Pfam: T2SSE AAA_7 nSTAND3 AAA_22 AAA_29 cobW ABC_tran FtsK_SpoIIIE TrwB_AAD_bind TsaE AAA_16 Septin AAA_23 AAA_18 AAA_28 AAA_14 AAA_33 AAA_30 DUF815 ATPase_2 AAA_21 Sigma54_activat RsgA_GTPase NTPase_1 GTP_EFTU Zeta_toxin Microtub_bd ResIII AAA AAA_2 NACHT PduV-EutP DUF87 AAA_8 DEAD Pox_A32 PIF1 AAA_19 IstB_IS21 AAA_24 MobB G-alpha
Other DBs
NCBI-ProteinID: ADB14599
LinkDB
Position
141416..142492
AA seq 358 aa
MIVNNIRDIDFGILQEFANDVRVTDMVVSESGRVWVDCGQGLKERATRVPLNNPALLREY
AVWLCAQLGKRLDDACPIADASSTSGIRIHAVLAPLVSQGAALSIRFPSINRYDLVSLSD
QGMFPKELSCILSVLVKKRANIMITGSTGSGKTTLMKALLAAADCEDRIVSVEEIRELGE
LTQNHVSLSAREANVEGVGEIGLSQLVKATLRMRPDRIILGECRGEEIADLLRVFTSGHK
GGMTTLHADEIEKVPARLMALGLLAGLEPAALCALAAGAFDVVIHVERSSNGRRMIKELG
ILQYASSASLLCGVPVLQLSCGIDGSIVMKFLPAWVKFSNYWNLPENMASVCVDSSNN
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgatcgtaaataatattcgtgatatcgattttggaattctgcaggaatttgccaatgac
gtaagagtcacagacatggttgtaagcgagtctggtcgtgtgtgggtagattgtgggcaa
ggtcttaaggaacgcgcaactcgagttccgcttaacaaccctgctttgttaagagaatat
gctgtatggctttgtgcacaattaggcaaaagactggatgatgcgtgtcctattgctgat
gcttcaagtacttctggcattcgcatacatgctgttttagcgccacttgtatctcaagga
gcagcattgtcaattcgttttccttcaattaatcgttatgatcttgtttctttgagtgat
caaggcatgtttccaaaagaattgtcttgtattctaagcgttctagttaaaaagcgagca
aatataatgatcactggaagtactggatctgggaaaaccacacttatgaaggctttgttg
gctgctgctgattgcgaagatcgtattgtatctgttgaagaaattagagagcttggcgag
ttgacgcaaaatcatgtttcgttaagtgcgcgagaagctaatgtagaaggtgtaggagaa
attggcttatctcaattagtaaaagcaacattaagaatgcgtccggatcgcattattctt
ggtgaatgtcgtggggaagaaattgctgatttgttgagagtgtttacttccgggcataag
ggtggaatgacaactcttcatgcagatgaaatagaaaaagttcccgctcgtcttatggca
ttagggttattggctgggttggagcctgcagctttatgtgctttagctgctggagcattc
gatgttgttattcatgtagagagatcctctaacgggcgtcgaatgatcaaagaactcggt
attttgcaatacgcttctagcgcttcgttgctgtgcggcgttccagttttgcaattatct
tgtggaattgacggcagtattgtcatgaaatttttgcctgcatgggttaagttttcaaat
tattggaatcttcccgaaaatatggcaagcgtatgtgttgacagttcaaataattag

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