Gardnerella vaginalis ATCC 14019: HMPREF0421_20604
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Entry
HMPREF0421_20604 CDS
T01344
Name
(GenBank) polyprenyl synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00900
Terpenoid backbone biosynthesis
gvg01100
Metabolic pathways
gvg01110
Biosynthesis of secondary metabolites
Module
gvg_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HMPREF0421_20604
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gvg01006
]
HMPREF0421_20604
Enzymes [BR:
gvg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
HMPREF0421_20604
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
HMPREF0421_20604
2.5.1.29 geranylgeranyl diphosphate synthase
HMPREF0421_20604
Prenyltransferases [BR:
gvg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HMPREF0421_20604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
ADP38686
UniProt:
E3D9E2
LinkDB
All DBs
Position
complement(749132..750232)
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AA seq
366 aa
AA seq
DB search
MWITLNMSLDSQKSCIETRISELIYDQFNSLACKNLISSCDKTLKDVVKQAISSSEGGKR
LRAYLALEAFDAVRGNCSKDTAYCAMLDVACALEVFQTAALVHDDIIDESALRRGRPSAY
CALSKACNSKHIGIGLGLMLGDILATQSFDITRKACTNLRNPQEVLGEFANMQRNVGIGQ
VLDLSIEMMSLKNPKKLAESSINVFRWKTASYTTIAPLALGFLSAGLNKNYAIKLANDIG
EPLGIAFQIADDLIDIVSDSAHTGKPIGGDIREGKRTVLLADALDLSSSEDRLFLIDAYN
SNNRNEDDVNRIINIFNQSGAISKSKKRIHNLWVESQEKIDNSTLSEFGKSILNEVSSKF
IPREWQ
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtggataactcttaatatgagtttagattcgcaaaagtcatgtatagagacgcgtata
agcgaattaatttatgaccaatttaattctttagcttgtaaaaaccttatttctagttgt
gataaaacacttaaagatgtagtgaaacaagcaatttcttctagtgaaggcggcaaaaga
ctcagagcttacttagctttagaagctttcgatgcagtacgcggtaactgctctaaagac
actgcatattgcgcaatgctagatgttgcatgtgctttagaagtctttcaaactgcagca
cttgtacatgacgatataatcgacgaatctgctttaagacgaggaagaccaagcgcatat
tgcgcattgagcaaagcatgcaatagcaagcatatcggcattggacttggattaatgctt
ggagatattttagcaactcaaagctttgacataactagaaaagcatgtactaatttgcgc
aatcctcaagaagttttaggcgagtttgcaaatatgcaaagaaatgttggtattggtcaa
gttttagatctttccatagaaatgatgagccttaaaaatccaaagaaactagcagaatcc
tcaataaatgtttttcgttggaaaactgcaagttacacaactatagctccacttgcgctc
ggatttttatctgctggacttaataaaaattacgctattaagttggcgaatgatattggt
gaaccattgggaattgcttttcagattgcagatgatcttattgatattgtttcagattct
gctcacactggaaagcctattggaggcgatattcgagaaggtaaacgcactgtccttttg
gctgatgctctagatctttcttcaagcgaagaccgtctatttttgatagatgcttataac
tctaataatcgcaatgaagatgatgttaataggattattaacattttcaatcagagtggt
gctataagtaagtctaaaaagcgcattcacaatctttgggttgaatcgcaagaaaaaata
gataacagtacattatctgaatttggaaaatccatattgaacgaggtttctagcaaattc
attcctagagaatggcagtaa
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