Gardnerella vaginalis HMP9231: HMPREF9231_0162
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Entry
HMPREF9231_0162 CDS
T01939
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gvh02048
]
HMPREF9231_0162 (hsdM)
Enzymes [BR:
gvh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
HMPREF9231_0162 (hsdM)
Prokaryotic defense system [BR:
gvh02048
]
Restriction and modification system (R-M system)
Type I R-M system
HMPREF9231_0162 (hsdM)
BRITE hierarchy
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GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
MTS
Eco57I
Motif
Other DBs
NCBI-ProteinID:
AEF31847
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Position
181754..183466
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AA seq
570 aa
AA seq
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MLLIVRVYSRILKNAYLISLYIAHALARIARIGSSRMDTRKEEERAELHRTIWKIADDLR
GSVDGWDFKAYVLCTMFYRYISENLCDYINKNEHESEGGDPDFDYAKISDEDAEPIRSEM
ISAKGFFILPSELFCNVLKRAPQDSDLNETLSRVFRNIEASSQGTDSSGDFKGLFSDYDV
NNIKLADTVEGRNKRFVKLLQVISEMKLGSVNNNVIEAFGDAYEYLMGLYASNAGKSGGE
YFTPAEVSMLLTRLGTVGKSSISSVYDPACGSGSLLLKAKKVLGIENINGGFYGQEKNVT
SYNLCRMNMFLHDVNFNKFEITCGDTLINPQIDANKKFELVVSNPPYSTSWEGDSNPLMI
NDPRFAPAGVLAPKSKADMAFVLHCLAHLAEDGAAAIVCFPGIMYRGGAEQKIRQYLVEH
NAVDCVIQLPSNLFFGTSIATCIMVLRKNKRNDTSILFVDASREFVKSTNSNKLSDENIE
QIVKWYTSRQDVEHIAHVASLEEVESNKYNLSVSTYVEAEDTREKIDITELNAQIVSVCA
REQELREQIEKIVSEIEAGSVNFDNSEVAQ
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
ttgctgctgattgtgcgcgtttacagtagaatattaaagaacgcttatttaattagctta
tatattgcgcatgcgcttgcacgaattgcacgaatagggagcagcagaatggacactcgc
aaagaagaagaacgcgcggaattgcatcgcacgatttggaagattgcagatgatttgcga
ggttctgttgatggctgggacttcaaagcatacgtgttgtgcacaatgttttatcgctat
atttccgagaatttatgcgattatatcaataaaaacgagcatgaatctgaaggcggcgat
ccagattttgattatgcaaaaataagcgatgaagatgccgagcctattcgcagcgaaatg
atctcggctaaaggtttctttatacttcctagcgaactgttttgcaatgtgttgaagcgt
gctcctcaagatagtgatttaaacgaaacgttgagccgcgtgttccgcaatattgaagcg
tcgtctcaaggaactgattcgtctggtgattttaagggattattctccgattacgatgtg
aataatattaagcttgcagatactgttgaaggcagaaataagcgttttgttaagttatta
caagtgattagtgagatgaagcttggtagcgtaaacaacaacgtgattgaggcttttggt
gatgcttacgaatatttgatgggcttgtatgcgtctaacgctggcaagtctggcggcgaa
tactttacgcctgcagaagtctcaatgctgctcacacgtcttggaacagttggaaaatca
agcatttccagcgtgtacgatcccgcgtgcggttctggctcgcttcttttaaaggccaaa
aaagtgctaggcattgaaaatattaatggcggtttttacggtcaagaaaagaatgttact
agctacaacttgtgccgcatgaacatgtttttgcatgatgtgaattttaacaagtttgag
attacttgcggcgatactcttataaatccgcaaattgatgctaataaaaagtttgagctg
gttgtttctaatcctccttattccacgagttgggagggggattctaatccgttgatgatt
aacgatcctcgttttgctccagctggagttcttgctccaaaaagtaaggcagatatggca
tttgtgttgcactgtttggcgcatttggcggaagatggtgctgctgctattgtttgtttc
cctgggattatgtatagaggcggagctgagcaaaagattcgccaatatttagttgagcat
aatgctgttgattgcgtgattcaacttccgagcaacttgttctttggtacttctattgct
acgtgcattatggttttgcgcaaaaacaagcggaatgatacttctatattgtttgttgat
gcgagccgagagtttgtaaagtcaacgaatagtaacaagctttcggacgagaacattgag
cagattgttaagtggtacacttctaggcaagatgtggagcatattgcgcacgtagcatct
ttggaagaagtagaatccaataaatacaatctttcggtttctacatatgttgaagcggaa
gatactcgcgaaaagattgatattacggagcttaacgcgcaaattgtgtcggtttgcgct
cgcgagcaagagttacgcgaacagattgagaagattgtaagcgagattgaagctggcagc
gttaactttgataatagcgaggtggctcaatga
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