Halobaculum sp. CBA1158: Hbl1158_14040
Help
Entry
Hbl1158_14040 CDS
T08013
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
hacb
Halobaculum sp. CBA1158
Pathway
hacb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hacb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hbl1158_14040 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hacb01007
]
Hbl1158_14040 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hacb03016
]
Hbl1158_14040 (lysS)
Enzymes [BR:
hacb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Hbl1158_14040 (lysS)
Amino acid related enzymes [BR:
hacb01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Hbl1158_14040 (lysS)
Transfer RNA biogenesis [BR:
hacb03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Hbl1158_14040 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
ParE_toxin
Motif
Other DBs
NCBI-ProteinID:
UIO99629
LinkDB
All DBs
Position
2687457..2689136
Genome browser
AA seq
559 aa
AA seq
DB search
MSADDRSPDIDPHAVGGRGGDGEADGHRAFWADEVADEVEARDPDEPIVIKGGVSPSGIA
HIGNFNEIIRGYFVAEVLRERGHEVRQVFTSDDKDALRKLPRKLADTDGDIVELGDVNAG
ALGENLGTPYTDIPDPFEDGHDSYAAHFAALLAADAEALGIPVEMVSNTDLYADGDFDDV
VERVLRNADAARETLGQYQDTVDEDYVPFMPQCSECGMLTQDVGEVDVDAREVRYRCSGI
EAGDRFMDGCGHEGVASFREGKLPWRFEWPAQWEVLGVDFEPFGKDHAEGSWPSGVDIAR
NVLGNEPPVPMVYEWFTLNGESLSSSEGHVVTVKEVLDLIEPEVLRYFFARNPKKAKDFD
VERLDQLVNEFDRFERAYFGEEEADERFAAVAERAYPFVVDEVREGRVRLPYTFAAVLGM
VDDREFRVQLARDEGHFTDETPEWAIEDALDRVERARRWAERCDNEYNYRLQSELPEHEF
DATVEDALDDLADFVEAGHDGEEIQGEIYETARRHDVDVGDFFSAGYRLFFDETQGPRLG
EFLGELEREFVVARLRREA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgacgaccggagccccgacatcgatccgcacgccgtcggggggcgcggcggc
gacggggaagccgacgggcaccgcgccttctgggccgacgaggtcgccgacgaggtggag
gcgcgcgaccccgacgagccgatcgtgatcaagggcggggtctcgccctccggcatcgcc
cacatcggcaacttcaacgagatcatccgcgggtacttcgtcgccgaggtgctgcgcgag
cgcggtcacgaggtccggcaggtgttcaccagcgacgacaaggacgccctccggaagctc
ccccggaagctcgcggacaccgacggcgacatcgtcgaactgggcgacgtgaacgccggc
gcgctcggggagaacctcgggacgccgtacacggacatcccggacccgttcgaggacggc
cacgactcctacgccgcccacttcgcggccctcctggcggccgacgccgaggcgctcggg
atccccgtcgagatggtgtcgaacaccgacctgtacgccgacggcgacttcgacgacgtg
gtcgagcgcgtgctccgcaacgccgacgcggcccgggagacgctcggccagtaccaggac
acggtcgacgaggactacgtcccgttcatgccccagtgttccgagtgcggcatgctcact
caggacgttggcgaggtcgacgtggacgctcgcgaggtccggtaccgctgctcgggcatc
gaggccggcgaccgattcatggacggctgcggccacgagggcgtcgcgtccttccgcgaa
gggaagctcccgtggcgcttcgagtggcccgcccaatgggaggtgctcggggtcgacttc
gagccgttcgggaaggaccacgccgagggctcgtggcccagcggcgtcgacatcgcgcgg
aacgtgctcggaaacgagccgccggtaccgatggtgtacgagtggttcacgctcaacggc
gagtcgctctcctcctcggagggacacgtcgtcaccgtcaaggaggtgctcgatctcatc
gagccggaggtgcttcgctacttcttcgcgcggaacccgaagaaggcgaaggacttcgac
gtcgagcggctggaccagctcgtcaacgagttcgaccgcttcgagcgcgcgtacttcggc
gaggaggaggccgacgagcgcttcgccgcggtcgccgagcgggcgtacccgttcgtcgtc
gacgaggtgcgcgaggggcgcgtccgcctgccgtacaccttcgccgccgtgctgggcatg
gtcgacgaccgggagttccgggtccaactggcgagagacgagggacacttcaccgacgag
acgcccgagtgggccatcgaggacgccctcgaccgcgtcgagcgcgcgcgtcggtgggcc
gagcgctgcgacaacgagtacaactaccgcctccagtcggagctgcccgagcacgagttc
gacgcgaccgtcgaggacgcgctcgacgacctggccgacttcgtcgaggcgggacacgac
ggcgaggagatccaaggcgagatctacgagacggcccgccggcacgacgttgacgtgggc
gacttcttctcggccggctaccggctgttcttcgacgagacgcaggggccccggctgggt
gagttcctcggcgaactcgagcgcgagttcgtcgtcgcccgcctgcgccgagaggcgtag
DBGET
integrated database retrieval system
