Helicobacter apodemus: CDV25_05390
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Entry
CDV25_05390 CDS
T05516
Name
(GenBank) menaquinone biosynthesis decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
had
Helicobacter apodemus
Pathway
had00130
Ubiquinone and other terpenoid-quinone biosynthesis
had01100
Metabolic pathways
had01110
Biosynthesis of secondary metabolites
had01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
had00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
CDV25_05390
Enzymes [BR:
had01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
CDV25_05390
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
ORC4_C
Clathrin-link
Motif
Other DBs
NCBI-ProteinID:
AWI34255
UniProt:
A0A2U8FFP5
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Position
complement(1101466..1103301)
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AA seq
611 aa
AA seq
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MRQTIDLLKAHNEIKIITEPLDIHLEIPHLAYLEVKKKDSKALLFTNPIHKEKNIHFKTP
VLMNLFGSFKRVELLIGDTQKIAEDIAYLLRLKPPKDFKTALKLLPKLLNLRFLAPKILK
EKGLCQALIQRGNVIDLQSLPILKTWEEDGGAFITMGQCYTQSLDGNVKNLGMYRLQVYD
KNHLGLHWQLHKDSMNLLQTYKEAKQKMPVSIAIGGDPLYTWCATAPLPYGLFELMLYGF
IRKKKPQMVKCLSNDLYVPYDCDYVIEGFVEPDTLRDEGKFGDHTGFYTPIEPYPVLKVE
AITSKVNPIYLATVVGKPPLEDKYLGYPTERIFLPLLQTTTPDLIDYYMPENGVFHNLIL
AKIKARFQGQAQQSMHAFWGVGQMSFVKHALFVGEDAPSLKEEAIIPYILNRFKVENCLI
TEGICDVLDHACSEYAYGGKLGIDCTGEEVQKSLEILSDKSLQELLNPLFKNIKHLKQFY
TSTKNPITLISIDKKTSLQTAFKKNIPKILNQHLSIGIFLDYQKNDLDNLYMILWRVVNN
IDAKRDIKIIHSMIFIDATDKNSKDGYTKEWPKETDCSQKVLKSLQKKGLLEDIKDLEAF
YKKFHIDKSYA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaactattgatttactaaaagcgcataatgaaataaaaatcataacagaacct
ttagatattcatttagaaattcctcatttagcctatttagaagtcaagaaaaaagattct
aaagccttacttttcaccaatcctatccataaagaaaaaaatattcattttaaaacaccc
gttttaatgaatctttttggaagtttcaaaagggtagaattactcattggggatacgcaa
aaaatcgcagaggatattgcatatctcctaaggttaaaaccccccaaagactttaaaacg
gctttaaaactcctcccaaaactgcttaatttgcgttttttagcccccaagattctcaaa
gaaaaaggactttgtcaagccctcatccaaagaggcaatgtaatagatttacaatccctg
cctattttaaaaacatgggaggaagatgggggtgcttttatcactatggggcagtgctac
acacaaagccttgatgggaatgttaaaaatcttggaatgtatcgtttgcaagtttatgat
aagaatcatttaggtttgcattggcaactccataaagattctatgaatttattgcaaacc
tataaagaagcaaaacaaaaaatgcccgttagcattgccataggtggagaccctctttat
acttggtgcgctactgcccctttgccttatggtttatttgaacttatgctttatggattt
atacgcaagaaaaagccacaaatggtaaaatgcctaagtaatgacttatatgtcccttat
gattgtgattatgtaatagaaggctttgttgagcctgataccttaagggatgagggcaaa
tttggagaccatactggattttacacacctattgaaccctatcctgtgctaaaggtagag
gctataacctctaaagtcaatcctatctatctagcgaccgttgtaggtaagcctccctta
gaggataaatacctaggttaccccacagagagaatctttttgccactcttgcagacaaca
actcctgatttaatagattattatatgccagaaaatggggtatttcataatctcatccta
gcgaaaattaaagcacgttttcaaggacaagcccaacaaagtatgcacgcattttgggga
gttggacaaatgagctttgttaaacacgccctctttgtaggagaggatgctccctcttta
aaagaagaggctattatcccctatatccttaatcgcttcaaagttgaaaattgtcttatt
acagagggaatttgtgatgtgctagaccacgcttgcagtgaatatgcttatgggggtaaa
ttaggtattgattgcacaggagaggaagtgcaaaagtccttggaaatattaagtgataaa
tcactacaagagctattaaatcccctctttaaaaatatcaaacatttaaaacaattttat
acttccaccaaaaaccccattaccctaattagtatcgataaaaagacaagcttgcaaaca
gcttttaagaaaaatatccccaaaatacttaatcaacatttaagtataggcattttctta
gactaccaaaaaaacgacttggataatctgtatatgattctttggagagtagttaataat
attgatgctaaaagggatataaaaattattcactcaatgatttttattgacgcaactgat
aagaatagtaaagatggttacaccaaagagtggccaaaagaaacagattgctctcaaaaa
gttttaaaatctcttcaaaaaaaaggcttattagaggatattaaagatttagaggcattt
tataaaaaattccatattgataaatcctatgcgtaa
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