Halomonas sp. SF2003: C8233_01635
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Entry
C8233_01635 CDS
T05423
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00250
Alanine, aspartate and glutamate metabolism
haf00280
Valine, leucine and isoleucine degradation
haf00310
Lysine degradation
haf00410
beta-Alanine metabolism
haf00640
Propanoate metabolism
haf00650
Butanoate metabolism
haf01100
Metabolic pathways
haf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C8233_01635 (gabT)
00650 Butanoate metabolism
C8233_01635 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C8233_01635 (gabT)
00280 Valine, leucine and isoleucine degradation
C8233_01635 (gabT)
00310 Lysine degradation
C8233_01635 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C8233_01635 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haf01007
]
C8233_01635 (gabT)
Enzymes [BR:
haf01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
C8233_01635 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
C8233_01635 (gabT)
2.6.1.48 5-aminovalerate transaminase
C8233_01635 (gabT)
Amino acid related enzymes [BR:
haf01007
]
Aminotransferase (transaminase)
Class III
C8233_01635 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AVV35311
LinkDB
All DBs
Position
complement(399206..400477)
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AA seq
423 aa
AA seq
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MSNEQLDVLKHKYVAKGAVTATPQFADTALNAEIWDADGNRWIDFAGGIGVLNLGHRHPK
VVAAVKAQLDKVMHTAAGVISYAPYVQLSQKLAELTPVRGPERKTLLVNSGAEAVENAIK
IARAATGRSGVITFDGAFHGRTMMTLAMTGKVLPYKNDFGPMPGDIFRAPYPNPIHGISE
EQSLNAIRTLFKTDIAPHRTAAIVIEPVQGEGGFYIASPSFLTALRELCDEHGILLIADE
VQSGFARTGKLFAMEHSGVEADIMTMAKSLANGMPLSAVVGTAEVMDSSGPGSLGGTYSG
NPLSCAAALAVIDVIHEENILERSTQMGEQLAARFAQWEERFAHVAHSRNQGSMAAFELV
DADGKPDPAATAAVCAKAKELGLILLSCGFYSNSIRVLVPLTVEPEVLEEGLDIVEKALE
SLA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
ctgagcaacgaacaactcgacgtcctgaagcacaagtacgtcgccaagggtgccgtcacc
gccacgccgcagttcgccgacaccgcactgaacgccgagatctgggatgcggacggcaac
cgctggatcgacttcgccggtggcattggcgtgctcaacctgggtcaccgtcacccaaag
gtcgtcgccgccgtcaaggcccagctcgacaaggtcatgcacaccgccgcgggcgtcatc
tcctatgccccgtacgtgcaactgagccagaagctggccgagctgacgccggtgcgtggc
ccggaacgcaagaccctgctggtcaactccggcgcggaagcggtcgagaacgccatcaag
atcgcgcgtgccgccactggtcgcagcggcgtcatcaccttcgacggcgccttccacggc
cgtaccatgatgactctggcgatgaccggcaaggtgctgccgtacaagaatgacttcggc
ccgatgccgggtgacatcttccgtgcgccctacccgaacccgattcatggcatcagcgaa
gagcagtccctgaacgccatccgcaccctgttcaagactgacatcgcaccgcaccgcacc
gcagctatcgtcatcgagccggtgcagggcgaaggcggcttttacatcgcctcgccgagc
ttcctgaccgcactgcgtgagctgtgtgatgagcacggcatcctgctgatcgccgatgaa
gtgcagtccggcttcgcgcgtaccggcaaactgttcgcgatggagcacagtggcgtcgaa
gccgacatcatgaccatggccaagagtctggccaacggcatgccgctgtcggccgtcgtc
ggcaccgccgaggtgatggattcctcaggcccgggctctctgggcggcacctacagcgga
aacccgctgtcctgcgccgcggcgctggccgtgatcgacgtcattcacgaagaaaacatt
ctggagcgcagcacccagatgggcgagcaactggccgcgcgtttcgcccagtgggaagaa
cgcttcgcgcatgtcgcgcactcacgtaaccagggctccatggccgcatttgagttggtg
gacgctgatggcaagccggatcccgccgcgacggcggccgtgtgtgccaaggccaaggag
ctggggctgatcctgctgtcttgtggtttctactccaactccatccgtgttctggtgccg
ctgaccgtggagccagaagttctggaagaaggcctcgatatcgtcgagaaggcgctggaa
agcctcgcctga
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