Halomonas sp. SF2003: C8233_08850
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Entry
C8233_08850 CDS
T05423
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00260
Glycine, serine and threonine metabolism
haf01100
Metabolic pathways
Module
haf_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C8233_08850
Enzymes [BR:
haf01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
C8233_08850
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
C8233_08850
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
FAD_oxidored
Pyr_redox_2
HI0933_like
FAD_binding_2
FAD_binding_3
NAD_binding_8
GIDA
Thi4
Pyr_redox_3
AlaDh_PNT_C
Pyr_redox
DAO
3HCDH_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AVV33764
LinkDB
All DBs
Position
complement(2171791..2174898)
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AA seq
1035 aa
AA seq
DB search
MSQQDNKTAAAPRRLASGGRIDRATPLTFTFNGKRYQGLAGDTLASALMANGLDVLNASF
KYARPRGLVAAGAEEPNAILQLGSTEAGQVPNVRATQQALYDGLEAHAVSGWVKAQKDLM
SRFLPQVGKLGGKFMPPGFYYKTFMAPASLWMTYEKYIRKAAGLGRSPLEEDPDIYDHLH
QHTDVLVIGSGPAGLMAALVAARSGARVILCDEQEELGGSLLSMSADCLDQTLDGKPAIE
WRDAVLAELEACEDVQLLPRTTANGYHDHNFVTLHERRTEHQADLAPLNARGAQQARSRL
HRVRTHRVIMATGAHERPLVYSHNDVPGNLLAGAVTTYLTRYGVAAGDKLVLSVNNDHAY
RAALAWAAAGREVVAIADARPAPSGVMVEAARAAGIRIIAGSAVIEAKGERRVTGARIAA
IDIDAFSVTGAVEELACDTIASSGGYSPVVHLAAHTGARPVWSDEIHGFLPALGAPMLKG
FDACGAANGSFALEDVLVAAYASGVAAVEACEFETAQAEVPAVSELAETPMLPLYQVPHD
KPTARAPKQFVDLQNDVTAAGIELATREGFESIEHVKRYTAMGFGTDQGKLGNINGMAVA
ARCLGQTIPDTGTTVFRPNYTPVTFGAIVGRHCGELFDPIRYTAMHEWHVAQGAKFEDVG
QWKRPWYYPQGNEDMHAAVERECLAVREKVGVLDASTLGKIDITGRDAREFLNRIYTNAW
AKLGVGKARYGLMCHDDGMVMDDGVTTCLAEDHFLMTTTTGGAASILEWLELWHQTEWPE
LDVQMTSVTDHWATLTVTGPEARALVGELTDIDLDRDSFKFMEVREGLIADIPGRIFRIS
FTGELSYELNVPANYGLHVWKRLFECGKKYGLTPYGTETMHVLRAEKGFIIVGQDTDGSI
TPEDLGMQWCVGYNKPYSWIGKRALSRPDTRRDDRKQMVGLIPTRKKAGDERIVLPEGSQ
IVFDPEHAIPMPMVGHVTSSYYSPTLGHGFALAVVKGGAKRIGETVFLPQADGTTLEAEI
TSPVFYDKKGERQHV
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaagataacaagaccgccgctgccccgcgccgtctcgcctcgggtggacgc
atcgaccgcgccacgccgctgaccttcaccttcaatggcaagcgctatcagggcctggca
ggcgataccctcgcctcggcactgatggccaacggcctcgacgtgctcaacgccagcttc
aagtatgcgcgtccgcgcggcctggtcgccgccggtgccgaagagcccaacgccatcctg
cagctgggcagcaccgaagcgggccaggtgcccaacgtgcgtgctacccagcaggcgctt
tacgatggcctggaagcccacgccgtcagcggctgggtcaaggcgcagaaggacctgatg
agccgcttcctgccgcaggtcggcaagctgggcggcaagttcatgccgccgggcttctac
tacaagaccttcatggcgccggcctcgctgtggatgacctacgagaagtacatccgcaag
gccgccggtctcgggcgttctccgcttgaggaggacccggacatctatgatcacctgcat
cagcacaccgatgtgctggtgatcggctccggtccggcaggcctgatggcggcgctggtc
gcggcccgcagtggcgcgcgcgtcatcctgtgtgacgagcaggaagagctgggtggctcg
ctgctctccatgtcggcggactgtctcgatcagaccctggacggcaagcctgccatcgaa
tggcgtgacgcggtgctggcggaactcgaagcctgcgaggatgtgcagctgctgccgcgc
accaccgccaatggctaccacgatcacaatttcgtgaccctgcacgagcgccgtaccgag
catcaggctgacctcgcgcccttgaatgcccgcggcgcccagcaggcacgttcacgtctg
caccgcgtgcgtacccatcgcgtcatcatggccaccggcgcccatgagcggccgctggtc
tacagccacaacgatgtgccgggcaacctgctggccggtgccgtcaccacctatttgacc
cgttacggcgtcgccgccggtgacaagctggtgctgtcggtcaacaacgaccacgcctat
cgcgcggcgcttgcctgggcggcggccggtcgtgaagtggtcgcgatcgccgatgcgcgt
ccggcgccctccggcgtgatggtcgaggcggcgcgcgctgcgggcatccgcatcatcgcc
ggctccgccgtgatcgaagccaagggcgaacgtcgcgtgacaggcgcgcgcatcgcggcc
atcgatatcgacgccttcagcgtgacgggggcggtggaagagctcgcctgcgacaccatc
gcaagctccggcggctacagcccggtggttcacctggcggcgcacaccggcgcgcgtccg
gtatggagcgacgagatccacggcttcctgcccgcgctgggcgccccgatgctcaagggc
ttcgatgcctgcggcgccgccaatggcagcttcgcgctggaagatgtgctggtcgcggcc
tacgccagcggtgtcgccgcggtggaagcctgcgagttcgagaccgcccaggccgaggtg
cctgcggtctcagagcttgcagaaacgccgatgctgccgctctatcaggtgccgcatgac
aagcccaccgcacgtgcgcccaagcagttcgtcgatctgcagaacgacgtcaccgccgcc
ggtatcgaactcgccacccgcgaaggcttcgagtccatcgagcacgtcaagcgctacacc
gcgatgggcttcggcaccgaccagggcaagctgggcaacatcaacggcatggcggtcgcc
gcgcgctgtctggggcagaccatccccgacaccggtaccaccgtgttccgtcccaactac
acgccagtgaccttcggcgccatcgtcggccgtcactgcggcgagctgttcgacccgatc
cgctacaccgcgatgcacgaatggcacgtagcgcagggcgccaagttcgaggatgtcggc
cagtggaagcgcccctggtactacccgcagggcaatgaggacatgcatgccgcggtcgag
cgcgagtgtctggcggtgcgcgagaaggtcggcgtgctggatgcctcgaccctgggcaag
atcgacatcaccggtcgcgatgcgcgcgaattcctcaaccgcatctacaccaacgcctgg
gccaagctgggcgtcggcaaggcgcgctacggcctgatgtgtcacgacgacggcatggtg
atggacgacggtgtcaccacctgtctggccgaagaccacttcctgatgaccaccaccacc
ggtggcgcggcctcgatcctggaatggctggagctgtggcaccagaccgaatggccggaa
ctggacgtgcagatgaccagcgtcactgatcactgggcgaccctgaccgtcaccggcccc
gaggcgcgtgcgctggtcggcgagctgaccgatatcgaccttgaccgtgacagcttcaag
ttcatggaagtgcgtgaaggtctgattgccgacattcccgggcgcatcttccgcatctcc
ttcaccggcgagctgtcctacgagctcaacgtgccggccaactacgggctgcatgtctgg
aagcgtttgttcgagtgcggcaagaagtacggcctcacgccctacggcaccgagaccatg
cacgtgctgcgcgccgagaagggcttcatcatcgtcggtcaggacaccgatggctcgatc
accccggaagatctcggcatgcagtggtgcgtcggctacaacaagccgtattcctggatc
ggcaagcgtgcgctgtcgcgtccggatacccgccgcgacgaccgcaagcagatggtcggc
ctgattccgacgcgcaagaaggccggcgatgagcgcatcgtgctgccggaaggctcgcag
atcgtcttcgaccccgagcacgccatcccgatgccgatggtcggccacgtgacctccagc
tactacagcccgacgctgggacatggcttcgcgctggcggtggtcaagggcggtgccaag
cgcatcggcgagacggtgttcctgccgcaggccgatggcacgacgctggaagccgaaatc
acctcaccggtgttctacgacaagaaaggggagcgccagcatgtctga
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