Halomonas sp. SF2003: C8233_11090
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Entry
C8233_11090 CDS
T05423
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf00540
Lipopolysaccharide biosynthesis
haf01100
Metabolic pathways
haf01250
Biosynthesis of nucleotide sugars
Module
haf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C8233_11090
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
C8233_11090
Enzymes [BR:
haf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
C8233_11090
Lipopolysaccharide biosynthesis proteins [BR:
haf01005
]
Core region
C8233_11090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
AVV34117
LinkDB
All DBs
Position
complement(2676263..2677219)
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AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGANIVKALNDRGRTDILVVDDLSDGTKFVNLADLTIADYLDKDDFLIRV
QSSLMGEYAELPKIEAIFHEGACSDTTEWDGQFMLENNFEYSKVLLNFCEANQIPFLYAS
SAATYGDSQVFKETPEFEGPLNVYGYSKLLFDQHVRQRWDSLTTQVVGFRYFNVYGPREQ
HKGKMASVAYHHHTQVKAGENPKLFGAYDGYDAGMQSRDFVYVGDVVDVNLWFLDHPEAS
GIFNLGTGRAEPFKAIAETVIEYYEKGEIEYIDFPENLKGRYQSFTRADIGKLRKAGCNV
EFKTVAQGTRAYLEWLNR
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgttaccggaggcgccggcttcatcggtgccaatatcgtcaaggcactcaat
gaccgcggccgtaccgatatcctggtggtggatgacctgagtgacggcaccaagttcgtc
aatctggcggacctgaccatcgccgattacctcgacaaggacgacttcctgattcgcgtc
cagtcgagcctgatgggcgagtatgccgagttgccgaagatcgaggcgatcttccacgaa
ggcgcctgctcggacaccaccgagtgggacggccagttcatgctcgagaacaacttcgag
tactccaaggtgctgctcaacttctgcgaagcgaaccagattcccttcctctacgcgagc
tccgcggcgacctacggcgacagccaggtcttcaaggaaacgccggagttcgaaggtccg
ctcaacgtctacggctactccaagctgctgttcgatcagcacgtgcgccagcgctgggac
agcctgaccacccaggtcgtcggcttccgctatttcaatgtctacggcccgcgtgagcag
cacaagggcaagatggctagcgttgcctatcaccatcacacccaggtgaaggcgggcgag
aaccccaagctgttcggcgcctacgatggctacgatgccggcatgcagagccgtgacttc
gtctatgtcggcgatgtggtcgacgtgaacctgtggttcctcgatcacccggaagcctcc
ggcatcttcaatctgggtaccggtcgcgccgagccgttcaaggcgatcgccgagaccgtc
atcgagtactacgagaagggcgagatcgagtacatcgacttcccggaaaacctcaagggc
cgctaccagagcttcacgcgtgccgatatcggcaagctgcgcaaggccggctgcaacgtc
gaattcaagaccgttgcccagggcacgcgcgcctatctcgaatggctgaatcgctga
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