Hipposideros armiger (great roundleaf bat): 109389905
Help
Entry
109389905 CDS
T04661
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai01524
Platinum drug resistance
hai03430
Mismatch repair
hai05200
Pathways in cancer
hai05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109389905 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109389905 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
109389905 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
109389905 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hai03400
]
109389905 (MSH6)
DNA repair and recombination proteins [BR:
hai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109389905 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
109389905
NCBI-ProteinID:
XP_019511405
EnsemblRapid:
ENSHARG00000008503
UniProt:
A0A8B7SHK9
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MSRQSTLYSFFPKSPVLNNANKASSEGGVAAATEASPSPCGDAAWSEAGPGPLVRSTSPP
KAKNLNGGLRRSAAPAAPSSSSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFIREKGK
SARIHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRADEALNK
DKIKRLELAVCDEPSEPEEEEMEVVATYASDKSEEDNEIESEEEVRPKAQGSRRSSRQIK
KRRVISDSDSDVGGSDVEFKPDAKEEGSSDEISSGMGDSDSEGLHNSVKVAPKRKRMVTG
NGSLKRKSSRKEMPPAIKRTTGISLETKSTLSAFSSPQNSESQGHISGGCDNSSHTTVWY
HETLEWLKEEKRRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIF
YKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQT
ETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLLSLKEKE
EDISGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETK
VILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNENSGVMLPQVLKGMTSES
DSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAARPGAVF
AKTNQRMVLDSVTLNNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPY
AINDRLDAIEDLMVVPDKISEVLDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYE
ETTYSKKKIIDFLSALEGFKVICKIIEVMEEVVDDFKSKILKQIITLKTKNPEGRFPDLT
MELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRS
IVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRD
VSLKDCMRRLFYNFDKNYKDWQAAVECITVLDVLLCLANYSRGGDGPMCRPVILLPKEDT
RVFLDLQGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGGKSTLMR
QAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHAT
EHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQSVAVRLG
HMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEVIQKGHRKAREFEK
MTHSLRLFREVCLACEKSTLDAEAVHKLLTLIEEL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagtttcttccccaagtctccagtgctgaataatgcc
aacaaggcctcaagtgaaggcggcgtcgccgctgccactgaggcctccccttccccctgc
ggggatgcagcttggagtgaggccgggcccgggcccttggtgaggtctacgtcgccgccc
aaggccaagaacctcaacggagggctgcggaggtcggcagcgcctgccgccccctccagc
agttcttgtgacttctcaccaggtgatttggtttgggccaagatggagggttacccctgg
tggccttgcctggtttacaaccacccttttgatggaacattcattcgtgaaaaagggaag
agtgcccgaattcatgtacagttttttgatgacagcccaacaaggggctgggttagcaga
aggctattaaagccatacacaggttcaaaatcaaaggaagcccagaaaggaggtcatttt
tacagtgcaaagcctgaaatactcagagcaatgcaacgtgcagatgaagccttgaataaa
gacaagattaaaaggcttgaattggcagtgtgtgatgagccctcagaaccagaggaggaa
gaaatggaggtagttgcaacttatgcatcagataagagtgaagaagataatgaaattgag
agtgaagaggaagtgcggcctaaggcccaaggatctaggcgaagtagccgccaaattaaa
aaacggagggtcatatcagactctgacagcgatgttggtggctctgatgtagaattcaag
ccagatgctaaggaggaaggaagcagtgatgaaataagcagtggaatgggggatagcgac
agtgaaggcctgcacaactctgtcaaagttgctccaaagcggaagagaatggtgactgga
aatggctctctcaaaaggaaaagttcaaggaaggaaatgcccccagccatcaaacgaaca
actggcatttcattagaaaccaagagtactttgagtgctttctcttcgcctcaaaattct
gaatcccagggccacattagtggaggatgtgataatagtagtcacaccactgtgtggtat
cacgaaactttagaatggcttaaggaggaaaagagaagagatatgcacaggaggcgaccc
gatcaccccgattttgatgcatctacactctatgtgcctgaggatttccttaattcctgt
actcctgggatgaggaagtggtggcagattaagtctcagaactttgatcttgtcatattt
tacaaggtggggaaattttatgagctgtatcacatggatgctcttattggagtcaatgaa
ctagggttggtattcatgaaaggcaactgggcccattctggtttccctgaaattgcattt
ggtcgatattcagattctctggtccagaagggctataaagtagcacgagtggaacagact
gagaccccggaaatgatggaggcacgatgccgaaagatggcacatatatctaagtatgat
agagtggtgaggagggagatttgtagaatcattaccaagggtacacagacgtacagtgtg
ctagaaggtgacccctctgaaaactacagtaaatatcttcttagcctcaaagaaaaagag
gaagatatttctggccacactcgagtatatggtgtatgctttgttgatgcttcactggga
aagtttttcataggtcagttttcagatgatcgtcattgttccaggtttaggactctagtg
gcacattatcccccagtacaagtcttgtttgagaaaggaaatctctcaacagaaactaag
gtgattctgaagggttcattatcctcttctcttcaggaaggtctgattccaggctcccag
ttttgggatgcagccaaaactttgagaactctccttgaagaagggtattttacagaaaag
ttaaatgagaacagtggggtgatgttaccccaggtgcttaaaggtatgacctcagagtct
gattctattgggttgacaccaggagagaagagtgaattggccctctctgctctaggtggt
tgtgtcttctacctcaaaaaatgccttatagatcaggaacttttatcaatggctaatttt
gaagaatatattcccttggattctgacatggtcagtgctgcaagacctggtgctgtcttt
gctaaaacaaatcaacgaatggtgctagattctgtgacattaaacaacttggaaattttt
atgaatggaacaaatggttctactgaaggtaccctactagagaagattgatacttgccat
actccttttggtaagcggctcctaaagcaatggctttgtgccccactgtgtaacccttat
gctatcaatgatcgtctagatgctatagaagacctaatggttgtgcctgacaaaatctct
gaggttttagaccttctaaagaagcttccagaccttgagaggctcctgagtaaaattcat
aacgttgggtctcccttgaagagccagaaccacccagatagcagggctataatgtatgaa
gaaactacatacagcaaaaaaaagattattgattttctttctgctctggaaggattcaaa
gtaatatgtaaaattatagaggttatggaagaagttgtcgatgacttcaagtccaaaatc
cttaagcagatcattactctaaagacaaaaaatcctgaaggccgttttcctgatttgact
atggaattgaaccgatgggatacagcctttgaccatgaaaaggctcgaaaaacaggactg
attactcccaaagcaggatttgactctgattatgaccaagctcttgccgacataagagaa
aatgaacagagcctcctggaatacttggagaaacagcgcagtcgaattggttgtaggagc
atagtctactgggggattggtaggaaccgttaccagttggaaattccagagaatttcatc
actcataatttgccagaagagtatgagttgaaatccaccaaaaaaggctgtaaacgatac
tggaccaaaactattgagaagaaattggctaatctgataaatgctgaagaacgcagagat
gtatcattgaaggactgtatgcggcgactattctataactttgataaaaattacaaggac
tggcaggctgctgtggagtgcatcacagtgttagatgtcttattgtgcctggctaactac
agtcgagggggtgatggtcctatgtgtcgtccagtaattctgttgccaaaagaagacact
cgcgtcttcttagaccttcaaggatcacgccatccctgtattacgaagactttttttgga
gatgattttattcctaatgacattctaatagggtgtgaggaagaagaggaggaaaatggc
aaagcttattgtgtacttgttactggaccgaatatggggggcaagtctacgctcatgaga
caggctggcctattagctgtaatggcccagatgggttgttatgtacctgctgaagtgtgt
aggctcacaccaattgatagagtgtttacgagacttggtgcctcagacagaataatgtca
ggtgaaagcacattttttgttgaattgagcgaaactgccagtatacttacacatgcaaca
gaacattctctggtgcttgtggatgaattaggaagaggtactgcaacatttgatgggact
gcaatagcaaatgcagttgtgaaagaacttgctgagaatataaagtgtcgtacattgttt
tctacccattaccattcattagttgaagattattctcaaagtgtggcagtgcgcctaggt
cacatggcatgcatggtagaaaatgaatgtgaagatcccagccaggagactattaccttc
ctctacaagttcatcaaaggagcttgtcctaaaagctatggctttaatgcagcgaagctt
gctaatcttccagaggaggttattcaaaagggacatagaaaagcaagagaatttgagaag
atgactcattcactgcgattatttcgggaagtttgcctggcttgtgaaaagtcgacttta
gatgctgaagctgtccataagttgctgactttgattgaggaattatag
DBGET
integrated database retrieval system
