Halobacterium salinarum NRC-1: VNG_1136G
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Entry
VNG_1136G CDS
T00038
Symbol
rpb3
Name
(GenBank) DNA-directed RNA polymerase II
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VNG_1136G (rpb3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_1136G (rpb3)
Enzymes [BR:
hal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VNG_1136G (rpb3)
Transcription machinery [BR:
hal03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
VNG_1136G (rpb3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF4198
Thioredoxin_14
Motif
Other DBs
NCBI-ProteinID:
AAG19520
UniProt:
Q9HQJ4
LinkDB
All DBs
Position
861696..862442
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AA seq
248 aa
AA seq
DB search
MSSQDFDVEFVDRDDREARFVVRNITPAFANGIRRAILVDVPTLSIDTVRFVENSSVMFD
EQLGLRLGLVPLTTPEDYAAGEAVTLALDVEGPGTAYSGDLVSNDPEVEAADENIPIIEL
KDDQRLELEADAVMGHGRDHAKHQGGVAVGYRHLQRVHVVGDSPEYADDDPQMLRGVIEE
DDELVPTDDFDNDLTTRYPGKEVEIEDVDGAFVFHVESDGSMPVEELVLRAVDTLVDRAD
ELEQAVQL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccaggacttcgacgtcgaattcgtcgaccgcgacgaccgggaagcccggttt
gtcgttcggaacatcacgcccgcgttcgcgaacggcattcgtcgcgccatcctcgtggac
gtgccgacgttgtccatcgacacggtgcggttcgtggagaactccagtgtgatgttcgac
gagcaactcggcctgcggctcgggctcgtgccactgacgacacccgaggattacgcggcg
ggcgaagcggttacgctcgccctcgacgtcgagggtccgggcaccgcgtactccggcgac
ctcgtgagcaacgaccccgaggtcgaggcggccgacgaaaacatcccgatcatcgagctg
aaagacgaccagcgcctcgagctcgaggcggatgccgtgatggggcatggccgcgaccac
gccaaacaccagggcggggtggcggtgggctaccgacacctgcagcgcgtacacgtggtc
ggtgacagcccagagtacgcggacgacgacccccagatgcttcgaggcgtcatcgaggag
gacgacgaactagtgccgactgacgacttcgacaacgacctgaccacccggtatcccggc
aaggaggtcgaaatcgaggacgtcgacggtgcgttcgtgttccacgtcgaatcggacggc
tcgatgcccgttgaagagctggtgctgcgtgcggtcgacaccctggttgatcgcgcggac
gaactcgaacaggcagttcaactgtaa
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