Halobacterium salinarum NRC-1: VNG_2666G
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Entry
VNG_2666G CDS
T00038
Symbol
rpoB''
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VNG_2666G (rpoB'')
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hal03021
]
VNG_2666G (rpoB'')
Enzymes [BR:
hal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VNG_2666G (rpoB'')
Transcription machinery [BR:
hal03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
VNG_2666G (rpoB'')
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AAG20694
UniProt:
P0CX04
LinkDB
All DBs
Position
complement(2000487..2002058)
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AA seq
523 aa
AA seq
DB search
MLQEDKRELSESYFSKERLAEHHFRSYNAFLEHGMQDVVTEKERIETDIGDKEDEEPVWV
ELGDVRAVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGEEEEERVLDTTE
TKVGRMPIMVGSDKCNISGFSDEELIEIGEDPADPGGYFIINGSERVLMTSEDLAPNKIL
AEYDSKYGDEIQVAKTFSQRRGYRALVLVERNREGLLEVSFPSVSGSISFVTLVRALGLE
SDEEIVHRVSEDPEIVKFMLENLEEADVQTQEEAIEDLGQRVASGQGKNYQLKRANYVID
RYLLPHLHEDGVEEEETRINKAYYLCRMAEACFELALGRREADDKDHYANKRLKVSGDLM
KDLFRTALNKLARDVKYQLERANMRNRELTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDFMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQAMELSQDVDDERDLKQELSSMGVEGIPGISMETTSTTSADD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctacaggaagacaaacgcgaactgtccgaatcgtacttctcgaaagaacgcctcgcc
gaacaccacttccgctcgtacaacgcgttcctcgaacacggcatgcaggatgtcgtcacc
gagaaagaacgcatcgagacggacatcggcgacaaagaggacgaagagccggtgtgggtt
gagctcggtgatgttcgagccgtcacgccccgcgtcagggaggccgacggcagcgaggag
ctgctgtacccacaggaagcgcggctgcggaacatcacgtactcggcgcccgtgttcatg
gagatgagcatcgtgcgtggtggcgaagaagaagaggagcgtgtcctcgacacgaccgaa
acgaaggtcggtcggatgcccatcatggtgggctcggacaaatgcaacatttccgggttc
agcgacgaggaactcatcgagatcggtgaggacccggccgaccccggggggtatttcatc
atcaacggcagcgagcgcgtgttgatgaccagcgaggacctcgcgccgaacaagatcctc
gccgagtacgactccaagtacggcgacgaaattcaggtggcgaagacgttcagccagcgc
cgcggttaccgcgcgctcgtgctcgtcgagcgcaaccgcgagggcctgcttgaggtgtcg
ttcccgtcggtctctgggtcgatcagcttcgtaacgctcgtgcgcgcgctcgggttggag
tccgacgaggagatcgtccaccgggtcagcgaggaccccgagatcgtgaagttcatgctg
gagaacttggaggaagccgacgtccagacccaggaggaagccatcgaggacctgggccag
cgcgtcgcctccgggcagggcaagaactaccagctcaagcgcgcgaactacgtcatcgac
cgctatctcctcccacacctccacgaggacggcgtcgaggaagaggagacacgcatcaac
aaggcgtactacctctgccggatggccgaggcgtgcttcgagttggcgctcggccgccgc
gaggccgacgacaaggaccactacgcgaacaagcgcctgaaggtctccggagacctgatg
aaagacctgttccgaacggcgctgaacaagctcgcgcgtgacgtgaaataccagctggag
cgcgcgaacatgcggaaccgcgaactcacggtgaacacggtggttcggtccgacgtgttg
accgagcgcctcgaacatccgattgcgaccgggaactgggttggtgggcggtccggcgtg
agtcagctcgtcgaccgcaccgacttcatgggtgtgctcagccacctgcgccgcctgcgc
agtccgctcagccgctcccagccgcacttcgaagcgcgggacctacacgcgacccagtgg
gggcgcatctgtccgtccgagacgccggaaggcccgaactgtgggctggtgaagaacttc
gcgcaggcgatggagctctcacaggacgtcgacgacgagcgggacctcaaacaggagctg
tcctcgatgggtgtggagggaatccccggcatcagcatggaaacgacatcgacgacgtcc
gcggacgactaa
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