Haliaeetus albicilla (white-tailed eagle): 104318839
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Entry
104318839 CDS
T08398
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
hald
Haliaeetus albicilla (white-tailed eagle)
Pathway
hald03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104318839 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hald03400
]
104318839 (MSH6)
DNA repair and recombination proteins [BR:
hald03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104318839 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
104318839
NCBI-ProteinID:
XP_009918569
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MFYSTKPEIKRAMVLADDAISKDKTKRLELAVCSEPSDTEEEEEEEEEEEMEMSESASGN
SDDCNSEEDVKSNKRVMSRGSAIKAKRRRVLDSDSDHDGSDVEFKPDVKEVASSEEGSSG
VDENESTDTETDAESVAESPIKVPSKRKRREINKPAKRSSLENERSETPKRAATVSLEAK
SKLTSFAAPETFESQANACSGGTSGFAVWEHEKLDWLQEGKKKDAHRRRQSDPGYDPCTL
HVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTW
AHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICRI
ITKGTQTYSVLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDRH
CSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLL
EEGYFKEKQNSENGCSLPSVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQ
ELLSLANFEEYVPVDIDTAKTTSPSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTL
LERIDSCFTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDL
ERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEI
ASDFKSKILKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYD
KALQDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVVSRNLPEEYELKS
TRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLD
VLMSLANYSQDGGGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGS
KDEDSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLG
ASDRIMAGESTFFVELSETSSILQHATEHSLVLVDELGTATFDGTAIASAVVKELAEKIK
CRTLFSTHYHSLVEDHSHNMAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGF
NAARLANIPEEVIQKGHRKAKEFEKMTLSLRVFRYLCLVVDGATSDANAVQKLTAMINHL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgttttatagtacaaagcctgaaattaagagagcaatggtgctagcggacgatgcaata
agtaaagataaaactaagcggcttgaactggcagtatgcagtgaaccttcagacacagag
gaggaggaggaggaggaggaagaggaggaaatggagatgagtgaaagtgcatcaggcaac
agtgatgactgcaatagtgaggaggatgtgaagagtaataagcgagtaatgagcagggga
agtgccataaaagccaaaagaagaagagtgttggattctgacagtgatcacgatggttct
gatgtagagttcaagcctgatgtgaaagaagtggcaagcagcgaggaaggtagtagtggg
gtggatgaaaatgaatctactgacacagagacggatgcagagagtgtcgcagaaagcccc
ataaaagtcccttctaaacgaaagagaagagagataaacaagcctgctaaaaggagtagc
ttagaaaatgaacgttctgaaacgcccaaaagagcagcaacggtttctttagaagccaag
tctaagctgacatcatttgcagcacctgaaactttcgaatctcaagcaaatgcttgcagt
ggaggcaccagtggcttcgcagtatgggaacatgaaaagcttgattggctgcaggaaggg
aaaaagaaagatgcgcacaggagacggcagagtgaccctggttatgacccatgtactctg
catgtgcctgaggactatctcaacaagtgtacgccaggaatgcggaggtggtggcagctg
aaaagtcaaaacttcgatgctgtgattttctacaaagttggaaaattctatgagttgtat
catatggatgcagtcactggtgtaaatgagttgggcctgatctttatgaaaggtacttgg
gcccattcaggttttccagaaactgcatttggcagattctctgatgttctagtgcagaaa
ggctacaaggtagcccgtgttgagcaaacagaaactcccgaaatgatggaaacgcgctac
aagtcaatggcccacccaacaaaatttgacaaggttgtacgccgagaaatatgcagaatc
atcaccaaaggaactcagacttacagtgttctggactgtgatccctctgagaaccataac
aaataccttctgtgcgttaaggaaaaagaagactcctctggacaacgtgtttatggagtc
tgctttgttgacacgtcggtggggaagttttacgtaggccagttctcagatgaccggcac
tgttcgaggtttaggactttagtagcgcattacactcccgtgcaggtactgtatgagaag
gggaacctgtctgtggacacacaaaagatactgaagggctcacttgtttcttgcattcag
gaagggctgatctctggttcccagttctggaatgcctctaaaacactaaaagtccttctt
gaagaaggatatttcaaggagaaacagaactctgaaaatggatgttctctgccctctgta
atcaaatctttgacttcagagagcgactcgctgggattaactcctggtgaaaacagtgag
ttagctttgtcagctcttgggggatgtgtcttctatctcaaaaaatgcttgattgatcag
gagctgttatcgctggcaaactttgaggagtatgtccccgtggatattgatactgcaaaa
actacgagtccaagtagtttctttgccaaaactgaccagcggatggtgctggatggagtc
accctgatgaacttggaagtcctgcagaacggaaccaacggaaccacagaaggtactttg
ttggaaaggattgattcttgttttacgccatttgggaagcgactcctgaaacagtggctc
tgtgctccgctttgtaatcctaaatccatcaatgatcgattagatgctgttgaggacctt
ctggcagtaccagataaaatgtctgaagttagcgagcacctgaagaaactgcctgacctt
gaaaggctgctcagcaaaattcacagtattggatcgccacttaaaagtcagaaccatcct
gacagcagggccatcttttatgaagaaatcaaatacagcaaaaaaaaaattgctgacttt
ttgtctgcactggaggggtttaaagtaatgaatgaaattgttgatgtcatggaagaaatt
gccagcgacttcaaatctaaaatccttaagcagctggtcacccgcaaagccaaaaatcca
gatggccgcttcccagacttgagtgcagagcttaaaagatgggatactgcttttgatcat
aaccaagctcgaaagacaggagtgattactccaaaggcaggttttgaccctgactacgat
aaagcactacaggatattaaagctgttgaggaagatcttcacaagtacctggataagcaa
cgcaaactgcttggattcaaatccatgctctactggggggcaggcaaaaaccgataccaa
atggaaataccggaaagtgtagtatcacgtaatttacctgaggaatacgagttgaagtca
accaggaagggatataagcgttactggaccaaggagatagagaagatgctggctgccatg
gttaatgctgaagagcgcagagatgcagcactaaaagactgtatgaggcgtttgttttac
aactttgataaaaatagcaaagactggcagacagctgtggaatgcattgctgtgttagat
gtcttgatgtcccttgctaactacagtcaagatggtggtggaccactgtgccgacctgta
attctactgcctgtggatagtgctcctcccttcctggaacttaaaaattcacgccatccg
tgtattacaaaaactttctttggggatgattttattcctaatgacattgtgataggcagc
aaagatgaagatagcagtagtgaagcttcctgtgtgttagtaactggcccgaatatgggt
ggcaaatctacgctcatgagacaggctggtctcctggttataatggctcaactgggatgc
tatgtacctgctgaagtctgcaggcttacaccgattgacagagtatttacgaggcttggc
gcctcagacagaattatggcaggtgaaagtaccttcttcgttgaattgagtgagacttcc
agcattctccagcatgcaacagagcattcccttgtccttgtggatgaactgggcacagct
acttttgatggaacagctatagcgagcgcagttgtgaaagaacttgcagagaaaatcaag
tgtcggactctgttctccacacactaccattcattggtagaggatcattcacacaacatg
gctgtgcggcttggccacatggcatgtatggttgaaaatgagagtgaggatccaagccag
gaaacaattacgttcctgtataagttcatcgaaggagcatgtccgaagagctatggcttc
aatgcagcaagacttgctaatattccagaggaagttattcagaaggggcacagaaaggcg
aaagagtttgaaaaaatgaccctttcactgagagtatttaggtatctctgcctggtggtg
gatggtgcaacaagtgatgcaaatgctgttcagaaacttaccgctatgatcaatcatctt
taa
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