Halomicrobium sp. LC1Hm: LC1Hm_0822
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Entry
LC1Hm_0822 CDS
T06261
Symbol
chiA
Name
(GenBank) Glycosyl hydrolase family 18, contains cellulose binding domain
KO
K13381
bifunctional chitinase/lysozyme [EC:
3.2.1.14
3.2.1.17
]
Organism
hall
Halomicrobium sp. LC1Hm
Pathway
hall00520
Amino sugar and nucleotide sugar metabolism
hall01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
LC1Hm_0822 (chiA)
Enzymes [BR:
hall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
LC1Hm_0822 (chiA)
3.2.1.17 lysozyme
LC1Hm_0822 (chiA)
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Motif
Pfam:
CBM_5_12
Glyco_hydro_18
CBM_5_12_2
Motif
Other DBs
NCBI-ProteinID:
QGA81884
UniProt:
A0A5Q0UK36
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Position
complement(757561..758991)
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AA seq
476 aa
AA seq
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MRRRTYVRSLSALVGLTGVGAASAQQEYPTWDASATYSEGDRVVYEGTIYEAQWWTQGDE
PGSTQWGPWSVVDSSDGGSDGGSDGGSDDGTDGGEETDYPAWDAGTTYTGGDRVVYEGTI
YEAQWWTRGDEPDAGGPWDEVGPVDGGGGDDGSGDDGSDDSDGDTGTPGAIPENVFAPFV
DVALDDQQALTDAVSNAGTKYFTLAFVNSAGGEPAWAGDSNLIVGESGERLDMQGQIADL
RADHDGEVIVSFGGLSGTYLAEAVTSASTLKEKYATVVDRLDAQFIDFDEEQHIRDNPEV
IERRNEALALLQAEYPELSISYTLPVMPSGLPEQSSNDVLFVLEDAAQRGVELDAVNLMT
MNYGSAFELNGETVVDAAESVHGQLADIYPDRSATERWNTIGLTPMIGQNDVDSNVFYPE
DAQTVLDFAQEKNLRWLSFWELVRDNGEGSALYESSQIEQEPYEFSSIFDAFTSDS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgacggacgtacgtacgatcactgtcggcgctcgtggggctcacgggcgtcggc
gcggcatcggcacagcaagagtacccgacgtgggacgcgagcgcgacctactcggagggc
gaccgggtcgtctacgaggggacgatctacgaggcccagtggtggacacagggcgacgaa
cccggtagcacccagtgggggccgtggagcgtcgtcgactcttcggacggtggctccgac
ggggggagcgacgggggcagcgacgacggcacagacggtggcgaggagaccgactacccg
gcctgggacgccggcaccacgtacaccggcggcgatcgggtcgtctacgaggggacgatc
tacgaggcccagtggtggacccgaggagacgagcccgacgccggtggaccgtgggacgaa
gtcggtcccgtagacggtggcggtggggacgacggcagcggtgacgacggcagcgacgat
tcggacggggacacgggtacaccgggcgcgatcccggagaacgtcttcgccccgttcgtc
gacgtggccctggacgaccagcaggcgctcaccgacgcggtctcgaacgccgggacgaag
tacttcacgctcgcgttcgtcaactccgccgggggcgagccggcgtgggccggcgactcg
aacctgatcgtcggcgagagcggcgaacgcctcgacatgcagggccagatcgccgatctc
cgggccgaccacgacggtgaggtcatcgtctccttcggcggtctcagcggcacgtacctc
gcggaggcggtgacgagcgcgagcacgctcaaagagaagtacgcgaccgtcgtcgatcgg
ctcgacgcgcagttcatcgacttcgacgaagagcaacacatccgcgacaatcccgaagtc
atcgaacgccggaacgaggcactcgctttgctccaggcagagtacccggagctgtcgatc
tcgtacacactgccggtgatgcccagcgggctccccgagcagtcgagcaacgacgtgctg
ttcgtgctcgaagacgcggcccagcgcggcgtcgaactcgacgccgtgaacctcatgacg
atgaactacggctcggcgttcgaactgaacggcgagaccgtcgtcgacgccgccgagagc
gtccacggacagctggccgacatctatccggatcggtcggccacagagcgctggaacacg
atcggtctgacgccgatgatcggccagaacgatgtcgactcgaacgtgttctaccccgag
gacgcacagacggtgctcgatttcgcccaggagaagaacctccggtggctgtcgttctgg
gagctcgtccgcgacaacggcgaggggagcgcgctctacgagagcagccagatcgaacag
gaaccctacgagttctcgtcgatcttcgacgcgttcacgagcgacagctga
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