KEGG   Halomicrobium sp. LC1Hm: LC1Hm_4111
Entry
LC1Hm_4111        CDS       T06261                                 
Symbol
fdfT
Name
(GenBank) Phytoene/squalene synthetase
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
hall  Halomicrobium sp. LC1Hm
Pathway
hall00100  Steroid biosynthesis
hall00909  Sesquiterpenoid and triterpenoid biosynthesis
hall01100  Metabolic pathways
hall01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:hall00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    LC1Hm_4111 (fdfT)
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    LC1Hm_4111 (fdfT)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:hall01006]
    LC1Hm_4111 (fdfT)
Enzymes [BR:hall01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     LC1Hm_4111 (fdfT)
Prenyltransferases [BR:hall01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   LC1Hm_4111 (fdfT)
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-ProteinID: QGA84443
UniProt: A0A5Q0URW4
LinkDB
Position
pLC1Hm-01:143914..144981
AA seq 355 aa
MTHHHTGPSESPLAYCHEAVQGVSRTFALTIDALDSPLADQICVGYLLCRIPDTVEDANH
VPAAAQQDLLGTYREVLQPGSSTSIESFTRQAREWMPAQNPSPDWELVGNAPTVMAAFEQ
FDPPTREAMLPPVREMTTGMARFVERYADEPGIRIQTGTELRSYCHYVAGTVGTLITNLL
AEQSLSEARETALRHNGEHFGRLLQLVNIAKDVHDDYVAENNVYLPAEWLAAEGVPQDRV
VDDDLRSEAVAVLSRTLDRARQHLDPAQSYIEEMPLGGGNTVVAWAVPYLLAVGTLRELR
ANPGAAFAAEAVKVSRKEVRTIVSAVSATDRQRLDLLRETVAASPLEAVPQPLSH
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgacccaccaccacaccggtccgtccgagtcccccctcgcgtactgtcacgaggctgtc
cagggcgtctcgcgaacgttcgcactaacgatcgacgcgctcgactcgccgctggccgac
cagatctgtgtcggctacctgctctgtcggattccggacacggtcgaggacgcgaaccac
gtcccggcggcggcacagcaggacctcctggggacgtatcgcgaggtcctccagcccggt
tcgtcgacgtcgatcgagtcgttcactcggcaggcccgagagtggatgccggcccagaat
ccctcaccggactgggaactcgtcgggaacgcaccgaccgtgatggcggcattcgagcag
ttcgacccacccacgcgggaggcgatgctgccgccggtccgcgagatgaccacgggaatg
gcccggttcgtcgagcggtacgccgacgagccggggattcgcatccagacgggcaccgag
ctacggagctactgtcactacgtcgcgggcaccgtcgggaccctgatcacgaacctcctc
gcagagcagtccctctccgaggctcgggagacggcgctgcggcacaacggcgaacacttc
ggccggctcctccagctggtgaacatcgcgaaggacgtacacgacgactacgtcgccgag
aacaacgtgtacctccccgcggagtggctggccgccgagggagtgccacaggatcgggtc
gtcgacgacgacctccgctcggaggccgtcgcggtgctgtcacggacactcgaccgggca
cggcagcacctcgatcccgcccagtcgtacatcgaggagatgccactgggcggcgggaac
accgtcgtcgcgtgggccgtgccgtacctgctggcggtcgggacgctgcgagaactgcgc
gcgaaccccggagcggcgttcgccgcggaggcggtgaaggtgtctcggaaagaggtgcga
acgatcgtgagcgcggtgtcggcgaccgatcgccagcggctcgatctgctgcgcgagacg
gttgctgcgagcccgctcgaagcggtcccccagccactctctcactga

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