Haloprofundus sp. MHR1: FCF25_01080
Help
Entry
FCF25_01080 CDS
T05952
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCF25_01080
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
halm01007
]
FCF25_01080
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halm03016
]
FCF25_01080
Enzymes [BR:
halm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FCF25_01080
Amino acid related enzymes [BR:
halm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FCF25_01080
Transfer RNA biogenesis [BR:
halm03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FCF25_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1e
PEP-utilisers_N
Motif
Other DBs
NCBI-ProteinID:
QCJ45794
UniProt:
A0A4D7H4C7
LinkDB
All DBs
Position
complement(225867..227555)
Genome browser
AA seq
562 aa
AA seq
DB search
MSVDDDQPTTVDDQPTTAADDEGGREDGGDTHHAFWADEVADEILARDPDEPIVVKGGIS
PSGVAHLGNFNEILRGYFVAEVLRERGYEVRQVFTSDDKDPLRKLPRKLADKEGNIVGLG
DVDAGALGQNLGKPYTDIPDPFGEAESYAAHFAALIEADAERLGVPVEMISNTELYADGT
FEPVVRHLLENADTAREVLSEYQSKVDDDYVPFNPVCGNCGKITETVTAIDLDAGTVDYV
CTDMTAGDNTISGCGHEGTATFREGKLPWRFEWPAQWQVLGVDFEPFGKDHAEGSWPSGE
DIARNVLGIEPPVPMTYEWFTLNGEPLSSSAGNIVTVAEVLELAEPEVLRYFFALNPRRA
RDFDLRRLDLLVNDFDRFERVYFGEETDENIEALADRAYPLLVDEVREDRVRLPYTFAAV
LGMVDDPELRVQMAKNEGHVTDETPEWAVEDAMERVEKARTWAERMDNEYNYRLQTELPE
VDLDGDVAAALSDLADFVEEGHTGEEIQGEIYEAAKVHDVQTGDLFQAGYLLFFDQTQGP
RLGEFLGELEAAFVVKRLRREE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgacgacgaccagccgacgaccgtcgacgaccaaccgacgaccgccgccgac
gacgaaggtgggcgggaagacggtggcgacacccaccacgcgttctgggccgacgaggtc
gccgacgagattctcgcgcgcgaccccgacgaacccatcgtcgtcaagggcggcatctcg
ccctcaggcgtcgcgcatctcggcaacttcaacgagattctccgcggctacttcgtcgcg
gaggtgctccgagagcgcggctacgaggtccggcaggtgttcacgagcgacgacaaggac
ccgctccggaagctcccccgaaagctcgccgacaaggaggggaacatcgtcggtctcggc
gacgtcgacgcgggcgcgctcggtcagaatttgggtaagccgtacaccgacattccggac
cccttcggcgaggccgagtcgtacgcggcgcacttcgcggcgctcatcgaggccgacgcc
gagcgactcggcgtccccgtcgagatgatatcgaacaccgaactctacgcggacggtacg
ttcgagccggtcgtccggcacctgctcgaaaacgccgacaccgcgcgcgaagtgctctcc
gagtaccagagcaaggtagacgacgactacgtcccgttcaaccccgtctgcggaaactgc
gggaagataaccgagaccgtcacggccatcgacctcgacgccggcaccgtcgactacgtc
tgcaccgacatgaccgcaggtgacaacaccatctccggctgcggtcacgaggggacggcg
acgttccgcgaggggaaactcccgtggcgtttcgagtggcccgcccagtggcaggtgctc
ggcgtcgacttcgagccgttcggcaaggaccacgccgagggctcgtggcccagcggcgag
gacatcgcgcggaacgtcctcggtatcgaacccccggtgccgatgacgtacgagtggttc
acgctcaacggcgaaccgctctcctcgtcggcgggcaacatcgtcaccgtcgccgaggtg
ctggaactcgccgaacccgaggtgcttcggtacttcttcgcgctcaatccgcgccgcgcg
cgcgacttcgacctgcgccggttagacctcctcgtcaacgatttcgaccgcttcgagcgc
gtctacttcggcgaggagaccgacgagaacatcgaagcgctggccgaccgggcatacccg
ctcctcgtcgacgaggttcgcgaagaccgggtccgtcttccctacacgttcgccgcggtg
ctggggatggtcgacgaccccgaactccgggtacagatggcgaagaacgagggtcacgtc
accgacgagacgcccgagtgggccgtagaagacgcgatggagcgcgtcgagaaggcccgg
acgtgggccgagcggatggacaacgagtacaactaccgcctccagacggaactgcccgag
gtggacctcgacggcgacgtggccgccgcgctctcggacctcgccgacttcgtcgaagag
ggccacaccggcgaggagattcagggcgaaatctacgaggcggcgaaggtgcacgacgtg
cagaccggcgacctgttccaggcgggctatctgctcttcttcgaccagacgcagggaccg
cgcctcggcgagttcctcggcgaactcgaagcggcgttcgtggtgaagcggcttcggcgc
gaggagtga
DBGET
integrated database retrieval system
