Haloprofundus sp. MHR1: FCF25_05175
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Entry
FCF25_05175 CDS
T05952
Name
(GenBank) RNA polymerase Rpb4 family protein
KO
K03051
DNA-directed RNA polymerase subunit F [EC:
2.7.7.6
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCF25_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halm03021
]
FCF25_05175
Enzymes [BR:
halm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCF25_05175
Transcription machinery [BR:
halm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FCF25_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
DUF5827
Motif
Other DBs
NCBI-ProteinID:
QCJ46543
UniProt:
A0A4D7GXX8
LinkDB
All DBs
Position
1024343..1024699
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AA seq
118 aa
AA seq
DB search
MTIFKEKLDEEYLTISEVKPLLQEVEAERAADEERELRYELARSIEHVNRFAVLDPEESR
ELVEELLELEKVDEQTAFKIADLLPQDRNELRAVYAQQRYALSGDELDDILDIVAKYA
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgacgatattcaaagagaagctcgacgaggagtacctcaccatctcggaggtaaagccg
ctgctccaagaggtcgaagcggagcgagcggccgacgaggagcgcgagctccgctacgag
ttggcgcgttctatcgagcacgtcaatcgctttgcggtcctcgacccggaggagtcgcgc
gaactcgtcgaagagctgctcgaactggagaaagtcgacgaacagaccgcgttcaagatc
gccgaccttctcccgcaggaccgcaacgaactccgcgccgtctacgcgcagcagcgctac
gcgctctccggcgacgaactcgatgacattctcgacatcgtcgccaagtacgcgtag
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