Haloprofundus sp. MHR1: FCF25_09160
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Entry
FCF25_09160 CDS
T05952
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FCF25_09160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halm03021
]
FCF25_09160
Enzymes [BR:
halm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FCF25_09160
Transcription machinery [BR:
halm03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FCF25_09160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
Mut7-C
Motif
Other DBs
NCBI-ProteinID:
QCJ47274
UniProt:
A0A4D7H843
LinkDB
All DBs
Position
complement(1814961..1817885)
Genome browser
AA seq
974 aa
AA seq
DB search
MQTPKEIGGIRFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLECR
TCGQHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRQCGRLALTDEEQAEFRARMQ
RAEELSEDWSDVMKAAVRQARKAKRCPHCNEPQHDIKHEKPTTYYEVQDVLSGEYSELIA
EAMQPDEEEDREGMAPQELAEKTDIDLQRVNQILSGEFRPRKEDRKAIEKALSIDLTVED
MNKLMPSDIRDWFEDIPNDDMETLGIDSERARPEWMILTVLPVPPVTARPSITLDNGQRS
EDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFIDNEISGTPPARHRS
GRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVASEMTQTM
NVTERNIEEARQYVRNGPENHPGANYVKRPDGRRLKVTEKNCEELAEKVELGWEVNRHLI
DGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTVVCPPYNADFDGDEMNMHALQNEEA
RAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHENPKFTETQALDLLRATRVDE
LPEPDGEENGESYWTGHSIFSELLPDDLSLEFSSSTGDDVVIEDGQLVGGTIDEDAVGAF
GGEIVDTITKVYSETRARVFVNEISALAMRAIMHFGFSIGIDDESIPEEAGEQVDEAIEN
AYERIDELIATYDAGELESLPGRTVDETLEMKIMQTLGKARDSAGEIADDHFGDDNPAVI
MARSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYKPNDLSAEAHGFVENSYR
GGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTIVQ
FEFGEDGTSPVKVSSSKDNDIDVESIADRVMDAEFDDEATRQQFLGREEPPTNLSEHAEP
RLGEARTQEVESDD
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccgaaagagatcggcggcatccgcttcgggctgatggacccggagacgtac
cgagacatgtccgcgacgaaggtcatcacggcggacacttacgacgacgacggctacccc
atcgacatggggctgatggacccgcgactgggcgtcatcgaccccggactggagtgtcga
acctgcggtcagcactccgggtcgtgtaacggccacttcggccacatcgaactggccgcg
cccgtcatccacgtcggtttcacgaagctcatccgccggctgctgcgctcgacgtgtcga
cagtgcggtcgtctcgcgctgaccgacgaggagcaggcggagttccgcgctcgcatgcag
cgcgccgaggaactcagcgaggactggagcgacgtgatgaaggccgcggtccggcaggcg
cggaaggccaagcgctgcccgcactgcaacgaaccgcagcacgacatcaaacacgagaag
ccgacgacgtactacgaggtccaggacgtgctctcgggcgagtactccgaactcatcgcc
gaggcgatgcagcccgacgaggaggaagaccgagaggggatggctccgcaggagctcgcg
gagaagaccgacatcgacctccagcgggtcaaccagattctctccggggagttccgcccc
cgcaaggaggaccggaaagccatcgagaaggcgctctccatcgacctcaccgtcgaggac
atgaacaagctgatgccctcggacatccgcgactggttcgaggacatcccgaacgacgac
atggagacgctcggcatcgactccgagcgcgcgcgccccgagtggatgattctcaccgtg
ctgccggtgccgccggtgacggcgcgtccgtccatcacgctcgacaacggccagcgctcc
gaggacgacctgacccacaagctggtcgacattatccgcatcaaccagcggttcatggag
aaccgtgaggccggtgctccgcagctcatcatcgaggacctctgggaactgctgcagtac
cacgtcaccacgttcatcgacaacgagatctcgggcacgccgccggcgcgacaccgctcc
ggtcgcccgctgaagacgctcagtcagcgcctgaagggcaaggaaggtcgcttccgcggc
tcgctctccggcaagcgcgtcaacttctcggcgcgtaccgtcatctcgccggacccgacg
ctctcgctcaacgaggtcggcgtccccgaccgcgtcgcgtcggagatgacgcagacgatg
aacgtcaccgagcggaacatcgaggaggcccggcagtacgtccgcaacggccccgagaac
catccgggcgcgaactacgtcaagcgccccgacggtcgccgtctgaaggtgaccgagaag
aactgcgaggaactcgcagagaaagtcgaactcggctgggaagtgaaccggcacctcatc
gacggcgacatcgtcatcttcaaccgccagccgtcgctgcaccggatgtccatcatggcc
cacgaggtggtcgtgatgccgtacaagacgttccggctcaacaccgtcgtctgtccgccg
tacaacgccgacttcgacggcgacgagatgaacatgcacgcgctgcagaacgaggaggcc
cgcgcggaggcgcgcgtcctcatgcgcgtgcaggaacagattctcagcccgcgcttcggc
gagaacatcatcggcgcgattcaggaccacatctccggcacctacctgctgacccacgag
aatccgaagttcacggagacgcaggcgctcgacctgctgcgcgcgacccgcgtggacgag
ctgcccgagccggacggcgaggagaacggcgagtcctactggacgggccactccatcttc
tcggagctgctgcccgacgacctctctctggagttcagcagttcgaccggcgacgacgtc
gtcatcgaggacggtcagctcgtcggcggcaccatcgacgaggacgccgtcggcgcgttc
ggcggcgagatcgtcgacaccatcaccaaagtgtactcggagacgcgcgctcgcgtgttc
gtcaacgagatctccgcgctggcgatgcgcgccatcatgcacttcgggttctccatcggt
atcgacgacgagtcgattccggaggaggccggcgagcaggtcgacgaggccatcgagaac
gcctacgagcgcatcgacgaactcatcgccacgtacgacgcgggcgaactcgagtcgctg
ccgggtcgcaccgtcgacgagacgctggagatgaagatcatgcagacgctcggcaaagcg
cgtgactccgccggtgagatcgccgacgaccacttcggcgacgacaaccccgcggtcatc
atggcgcgttcgggcgcgcgtgggtcgatgctgaacctcacgcagatggccggctgtgtc
ggacagcaggcggttcgcggcgagcgcatcaaccgcggttacgaggaccgcacgctcagc
cactacaagccgaacgacctctccgcggaggcgcacggcttcgtggagaactcctaccgc
ggcggtctcacgccgcgcgagttcttcttccacgcgatgggtggccgcgagggcctcgtc
gacacggcggtccggacctccaagtccggatatctgcagcgtcggctcatcaacgcgctc
tccgaactggagacgcagtacgacggcacggtgcgcgacacctcggacaccatcgtccag
ttcgagttcggcgaggacggcacctcgccggtgaaggtgtcctcctcgaaggacaacgac
atcgacgtcgagagcatcgccgaccgcgtgatggacgcggagttcgacgacgaggcgacc
cgtcagcagttcctcggccgcgaggaaccgccgacgaacctctcggagcacgccgagccg
cgtctcggcgaggcgcgcacccaggaggtagaatcagatgactga
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