Halorubrum sp. CBA1229: Hrr1229_006400
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Entry
Hrr1229_006400 CDS
T06658
Name
(GenBank) DNA-directed RNA polymerase subunit B''
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
halq
Halorubrum sp. CBA1229
Pathway
halq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hrr1229_006400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halq03021
]
Hrr1229_006400
Enzymes [BR:
halq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hrr1229_006400
Transcription machinery [BR:
halq03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Hrr1229_006400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Acetate_kinase
Motif
Other DBs
NCBI-ProteinID:
QKY16527
UniProt:
A0A7D5CG31
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All DBs
Position
1277407..1278972
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AA seq
521 aa
AA seq
DB search
MNRQDRRVVSREYFSDERLAEHHFRSFNNFLDRGMQEVVDEKETIETDIGDKEGQEPVYV
ELGDVRMVTPRVREADGSEELLYPQEARLRNITYSAPVFMEMSIVRGGEDEPEQVVDTTE
TKVGRMPIMVGSDKCNMAGFSDEELIDIGEDPVDPGGYFIVNGSERVLMTSEDLAPNKIL
AEYDSKYGDEIQVAKTFSQRRGYRALVLCERNREGLLEVSFPSVSGSIDFVTLVRALGLE
SDEEIVHRVSDDPEIVKFMLENLEEAEVQTTEEAIETLGERVASGQGKNYQLKRANYVID
RYLLPHLHEEGVEEEDVRINKAYYLCRMAEACFELALDRRESDDKDHYANKRLKVSGDLM
RDLFRTALNKLARDVKYQLERANMRNRQLTVNTVVRSDVLTERLEHPIATGNWVGGRSGV
SQLVDRTDYMGVLSHLRRLRSPLSRSQPHFEARDLHATQWGRICPSETPEGPNCGLVKNF
AQSMELSQTVEDEQGLKRELASMGVEGIPGIEGVERQTADD
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaagaccgacgcgtggtctcacgcgaatacttctcggacgaacggctcgcc
gaacaccacttccgctcgttcaacaacttcctggaccgcggcatgcaggaggtcgtcgac
gagaaggagacgatcgagaccgacatcggcgacaaggagggacaagagcccgtctacgtc
gagctcggcgacgtgcggatggtcaccccgcgcgtccgcgaggccgacggctccgaggag
ctgctgtacccccaggaggcccgtctccggaacatcacctactcggcgcccgtcttcatg
gagatgtccatcgtgcgcggcggcgaggacgagcccgaacaggtcgtcgacacgaccgag
acgaaggtcggccggatgccgatcatggtcggctcggacaagtgtaacatggccggcttc
tccgacgaggagctcatcgatatcggcgaggaccccgtcgaccccggcggctacttcatc
gtcaacggctccgagcgcgtgctgatgacctcggaggacctggcgccgaacaagatcctc
gcggagtacgactcgaagtacggcgacgagatccaagttgccaagacgttctcccagcgc
cgcggctaccgcgcgctggtgctgtgcgagcgcaaccgcgagggactgctcgaagtgtcg
ttcccgtccgtctcgggctcgatcgacttcgtgacgctcgtccgcgcgctcggcctcgaa
tcggacgaggagatcgtccaccgcgtctcggacgaccccgagatcgtgaagttcatgctg
gagaacttagaggaggcggaggtgcagacgaccgaggaggccatcgagaccctcggcgag
cgcgtcgcctccggccagggcaagaactaccagctcaagcgggcgaactacgtcatcgac
cgctacctcctgccgcacctccacgaggagggcgtcgaggaggaggacgtgcggatcaac
aaggcgtactacctctgccggatggccgaggcgtgcttcgagctcgccttagaccgccgc
gagtccgacgacaaggaccactacgccaacaagcgcctgaaggtctccggcgacctgatg
cgcgacctgttccggaccgccctgaacaagctggcgcgcgacgtgaagtaccagctggag
cgcgcgaacatgcggaaccggcagctcaccgtcaacacggtcgtccgctccgacgtgctg
accgagcggctcgaacacccgatcgcgacgggcaactgggtcggcggccgctcgggcgtc
tcccagctcgtcgaccggacggactacatgggcgtgctctcgcacctgcggcgcctgcgc
tcgccgctgtcgcggtcgcagccgcacttcgaggcgcgggacctccacgcgacccagtgg
ggtcgcatctgtccctccgagaccccggaggggccgaactgcgggctcgtgaagaacttc
gcgcagtcgatggagctgtcgcagacggtcgaggacgaacaggggctgaaacgagaactg
gcgtcgatgggtgtcgaggggatccccggcatcgagggcgtcgaacgacagacggcggac
gactaa
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