Halocella sp. SP3-1: D7D81_13240
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Entry
D7D81_13240 CDS
T05769
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hals
Halocella sp. SP3-1
Brite
KEGG Orthology (KO) [BR:
hals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hals03009
]
D7D81_13240 (rimO)
Enzymes [BR:
hals01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D7D81_13240 (rimO)
Ribosome biogenesis [BR:
hals03009
]
Prokaryotic type
ribosomal protein modification factors
D7D81_13240 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
FAM186A-B_N
Motif
Other DBs
NCBI-ProteinID:
AZO95481
LinkDB
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Position
complement(2751602..2752921)
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AA seq
439 aa
AA seq
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MTTISLISLGCSKNQVDSELMLGTLSKSDNIRIIDNPANADIIIINTCGFIQDAREESID
TIIQAGQLKKHGQCKSIIVTGCLTQRYRDEILNELPEVDAIIGTSKFDEITDILKLTLSG
NRVNRVVSPAFSYKSSQARVLSEPHYAYVKIAEGCNNNCSYCSIPRIRGPLYSRQMEDIY
EEVAGFVEKGVKEIILVAQDTTCYGLDIYGKPALADLLEKLNKIKNLKWLRIMYSYPERI
NNRLISIMANSDKICNYLDLPVQHSSNKIRKRMNRTGRRSQLLTRIKKLRREIPGIALRT
SLIVGFPGETDEDFGDLIDFIQQIRFDRLGVFKYSAEEDTPASSYRGQIPEDIKEERYQK
IMEIQREISYNNNQRLVGKNIEVLIDEITDEYAIGRSRYDAPEIDNQVYLAVKSYRKGDL
LYCKVSDAYEYDLIGEIIK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgactacaatatcattaataagccttggttgttccaaaaatcaggttgatagtgaactt
atgttgggtactttgtctaaaagtgataatattcgtataatagacaatccagctaatgct
gatataataataattaatacttgtggatttattcaggatgccagggaagaatcgattgat
acaataattcaggctggtcagttaaaaaaacatgggcagtgtaagtctattattgtaact
ggctgtcttactcagagatatagagatgaaatactaaatgaactacctgaagttgatgca
attataggaacgagtaaatttgatgaaataacagatattctaaaacttaccctaagtgga
aatagggttaatagagtggtttctccagcgttttcatataaatcttcacaggcgagggtc
ttatcagaaccacattatgcttatgttaaaatagcagaaggttgtaataataattgtagt
tactgtagtatacctagaataaggggtcctttatacagccgtcaaatggaagatatttac
gaagaagtagcagggtttgtagaaaagggtgttaaagagattatattagttgctcaggat
actacctgttacggtctggacatatatggaaaacctgccctagctgacttgttagaaaaa
ttaaataagattaaaaatcttaaatggttgagaataatgtatagttatcccgaaaggatt
aacaacagacttattagtataatggctaatagtgataagatttgcaattaccttgatctt
cctgtacaacattcttcaaataaaataagaaaaagaatgaatagaacaggtagaaggtct
caactccttactaggataaaaaaacttagaagggaaataccaggtattgccctcagaacc
tcattaatagtcggttttccaggtgaaacagatgaagacttcggggatttaatagatttt
atccagcagataaggtttgatagattaggtgtttttaagtattctgctgaagaggatacc
ccggcttcatcatatagaggacagattcctgaggatattaaagaagaaaggtatcaaaag
ataatggaaattcaacgggagatatcttataataataatcagagactagtggggaaaaat
atagaggtattaatcgatgaaattacagatgaatatgcaattggacggagcagatatgat
gcgcctgagattgataatcaggtctatctagctgtaaaaagttataggaaaggtgatctg
ctctattgtaaagtcagtgatgcctacgaatatgatttaataggagagataattaaatga
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