Homarus americanus (American lobster): 121861362
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Entry
121861362 CDS
T07477
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
hame
Homarus americanus (American lobster)
Pathway
hame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121861362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hame03400
]
121861362
DNA repair and recombination proteins [BR:
hame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121861362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
121861362
NCBI-ProteinID:
XP_042214945
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MVWAKLEGYPWWPALVCESPGDKVFNRDGLIHVQFFDNPPTRGWVKEVFVKPYCPAGENG
IPTYKDPSWIHAVKEANEAQQLSKDDREMLLVEMLPSDEDEAMDTDEEASDQSKENLDLN
VKKNKNSRKTHSTGGEPIKKRRRIILHSDSESEDDYKPEKIASDSDDGSVSSAVNEDEVS
EPEVESEIDSPVKAPANKRKKPTPARGRNLNSSFSSSPSTSKTPTCAPPTPKVSEGTKSK
LSLFAVKETPPPVQDRTEDWPFLKYPWLQPDNIRDRDKRAPDHPKYNPRTLYVPESFLNQ
QTPALRQWWEIKSQHKDTILFFKMGKFYELFNMDATLGVQELGLLMMKGDKAHVGFPEIA
YGRYSSSLIEKGYKVARIEQTETPEMMEKRCKTLSRPTKFDRVVKREVCQVSSRGTRVYS
FLDGEASEASTSYLLALTERGAGDGSEFGVAFIDTSIGXIHVGQFTDDRHASRLCTLMAH
HPPASSKPSKIWTTCAKKRLSVSSGKCTNILFERGQLSQKTQKVATSAVPSNLLENLTPE
KEFWTATKTLTFLAKGNYFKDEGGDSSVQWPKNKKMMDDSDSFGITARPKYTLAVSALGA
LIWYLSDCCLEEQLLTRRKFEEYNPLDAVAVSRTKNSSVPEFISGRYHMVLDGTTLRNLE
IFENTSGGTEGTLIDRLDRCSTAFGKRLLRKWVCAPLCSPSTINSRLDAIDDLRKNPDVV
EEVTAYLKSLPDLERILSKIHTQGLNRSSKHPDSRAILFEDVKYNKKKVVDFLSALNGFK
TTLQILKAFKGVRDSLSSKLLRKCMTSTKKGGNFPPLQEALHFFDNAFDHVEAQKEGKII
PSAGVDAEYDKAIDDIKKTKNKLAEYLKQQCRHFGTKVVYWGNDKKRYQLEVPEHACRKA
GDEYELQTQKKGYKRFWTTTTKDLLADMMAAEEHQDAALRDIARRIFHQCDEHHKKWESV
LQCVAVLDVLLSFTRYSQEANTIRPDIITPEEGAQPFIDIRDGLHPCVVTTFSGDEFIPN
DLVIGGTSEDAHAAMVLVTGPNMGGKSTLMRQTALICILAQLGTFVPASSCRLTPIDRIF
TRIGASDRLMMGESTFFVELAETSSIIQHATQHSLVLVDELGRGTATYDGTAIASAAVEA
LVKLKCRTLFSTHYHSLVDDFMIIKNVSLGHMACMVEGENEDDPSQETITFLYKFTEGAC
PKSYGFNAARLADLPDQVIRRGSQKAQELEKCNFRRRTFSKIFSRSSNGLENLRDSIKEI
RDVQ
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggctaaattggaagggtatccctggtggcctgcactagtctgtgagagtcca
ggtgataaagtttttaatcgtgacggtctgatacatgtccagttctttgacaaccctcct
acacgaggatgggtcaaggaagtgtttgtgaagccttactgtccagcgggagaaaatggc
atcccaacatataaggacccatcatggatacatgctgtaaaagaagccaatgaagcacag
cagctgtccaaagatgatagagaaatgttactcgtggaaatgcttccttcagatgaagat
gaagcaatggacactgatgaggaggccagcgaccaaagtaaggaaaatcttgacctgaat
gtgaagaaaaacaaaaacagtcgcaaaacgcacagtacgggaggtgagccaataaagaag
cgcagacggatcatcctccactcagacagcgaatcagaggatgactacaaacctgagaaa
atcgccagtgatagtgacgacgggtcagtgagttctgccgtgaatgaggacgaagtatcg
gagccagaagtagagtcggagattgattccccagttaaggcacctgcaaataagcgtaaa
aagccgacaccagcacgtggacgtaatttaaactcgtccttttcgtcatctccgtctact
tctaagacccctacatgtgccccacccactcctaaggtctctgaaggcaccaaatccaag
ttgtccttatttgctgtaaaagagacacctccaccagtccaggaccgcactgaggactgg
cccttcttgaagtacccttggctgcagcctgacaatatacgtgaccgtgacaaacgcgcc
ccagaccacccaaagtacaacccaagaactctctatgttcctgaaagcttcctcaatcag
cagactccagctctgagacaatggtgggagattaagtcacagcacaaagatacaattctg
tttttcaagatgggcaagttttatgaattatttaatatggatgccacgcttggggtgcag
gagcttggccttcttatgatgaaaggagataaagcgcatgtaggattcccagagattgca
tatggacggtattcatcatctctcatagaaaagggttacaaagttgcacgtattgaacaa
acagaaactccagaaatgatggaaaagcgctgcaagaccttgtctcgtccaacaaagttt
gatcgtgtggtaaagcgggaagtgtgccaagttagcagtagaggaacgcgtgtctacagc
tttctagatggagaagcatcagaagcctctacctcctacctcttagctcttactgaaagg
ggagctggggatggcagtgagtttggtgtagccttcattgataccagtatagganacatt
cacgtgggtcagtttactgatgaccgccatgcatccaggctgtgcaccttgatggctcat
cacccacctgcctccagtaaaccctcgaagatctggaccacctgtgcgaaaaaacgattg
tccgtatcttccggcaaatgcactaatattctctttgaaagaggacagttgtcacaaaaa
acacaaaaggtggccacttcagctgtaccttccaatttactggaaaatttaacaccagag
aaggagttctggacagccaccaaaaccctaaccttcttggctaaaggaaattacttcaaa
gatgaggggggagattcatctgtacagtggccaaaaaataaaaagatgatggatgacagt
gactcatttggtattactgctcgccctaaatacactcttgctgtgtctgctctgggtgca
cttatctggtatctgtcggattgttgtctagaagaacagctgctcacaagacgtaagttt
gaggaatataaccctcttgatgctgtggctgtctctagaaccaagaactcctctgttcca
gaattcattagtggaagataccatatggtacttgatggaacaacacttcgtaacttagaa
atatttgagaacacttcgggtggcacagaaggaacacttattgacagacttgatcgttgt
tccactgcatttggtaagagattacttcgcaagtgggtctgcgctcctctctgtagcccg
tcaaccattaacagtcgtttggatgccattgatgacttgcgaaaaaatcctgatgttgtg
gaggaagtaacggcttacctcaagagcctaccagatttggagaggatcttgtctaaaatc
cacactcaaggtttgaaccgcagctccaaacatccagacagtcgagccatactctttgaa
gatgttaaatataataagaagaaagttgttgattttctgtctgcactgaatggattcaaa
accacactgcagatattgaaggcattcaaaggtgttagagattctcttagctctaagttg
ctgaggaagtgtatgactagtacaaaaaagggtggtaatttccctcctctacaagaagct
ctccatttctttgataatgcttttgatcatgttgaagcacagaaggaaggtaaaataatc
ccgagtgcaggtgttgacgcagaatatgataaagccattgatgatataaagaaaacaaag
aacaaacttgcagaatacctcaagcagcagtgcagacactttgggacaaaggtggtgtac
tggggtaatgataaaaagagataccagctggaggtgccagaacatgcctgcaggaaagcg
ggggatgagtatgaactacagacccaaaagaaaggttacaaacgtttctggacaacaact
acaaaagacttgctggcagacatgatggcagcggaggaacatcaggacgcagctctcagg
gatattgcacgcagaatattccatcagtgtgacgaacaccacaagaagtgggagtcagtg
ctgcagtgtgtggcagtacttgatgttctgttgtcttttacccggtactctcaggaagct
aacaccatcagaccagacatcatcacgcctgaagaaggtgcacagccattcattgatatc
cgagatggcctccacccatgtgtggtgacaacatttagcggcgatgaatttattcctaat
gacctggtgataggtggtactagtgaagatgctcatgctgccatggtcttagtcacagga
cccaacatgggtggcaagtcaacactgatgagacagactgccctcatctgtattttggca
caactgggaacttttgttcctgcaagttcatgcaggctaacaccaatagacagaatattt
accaggattggtgcatctgaccgtttaatgatgggagagtcaactttcttcgtagaatta
gcggaaacttcctccatcatccaacatgcgacccaacactcgcttgttttggtggatgaa
cttggtcgtggcaccgctacctatgatggcacagcaatagcatctgctgcagtggaggct
ctggtaaagctcaagtgccggacactcttctccacccactaccactccctagttgatgac
tttatgatcattaagaatgtgtcccttggtcatatggcatgtatggtagaaggagaaaat
gaagatgacccatcacaggaaactattacgttcctttataaatttactgaaggagcctgc
cctaaatcatacggatttaatgctgctcgtttggcagacttgcctgaccaagttattcga
aggggtagtcaaaaagcacaagaactggagaaatgcaactttagaaggcgaaccttttca
aaaattttcagcagatcgtctaatggtctggagaatttgcgagactcgattaaagagata
cgggatgtacagtga
DBGET
integrated database retrieval system
