Homarus americanus (American lobster): 121863618 Help Entry 121863618         CDS       T07477                                  Name (RefSeq) mucin-17-like isoform X1   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism hame  Homarus americanus (American lobster) Pathway hame03020   RNA polymerase hame03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hame00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     121863618   09124 Replication and repair    03420 Nucleotide excision repair     121863618  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hame03021]     121863618    03400 DNA repair and recombination proteins [BR:hame03400]     121863618 Enzymes [BR:hame01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      121863618 Transcription machinery [BR:hame03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      121863618 DNA repair and recombination proteins [BR:hame03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       121863618 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-MYND Motif Other DBs NCBI-GeneID:  121863618 NCBI-ProteinID:  XP_042218290 LinkDB All DBs Position Unknown AA seq 2993 aa AA seqDB search MAAPQQHTLTNTSTIVASPAVLAAASVNTTSSASADTYGSGHHASCDEVYSRLSGVGVGG LNPPTTPAHYPPLPASRRLRPCSLCGTAALRPHTPIVPTSPVGALEQPVVLLHRLEDGLP QGDVNSLRAYGTIRLLPVHSPTHNATSEDDRSDQDGDSNERPVNHAMAHPKHTDDAGKHE DTSSSAHYASWTCSNGEHSLSDEHSVGEVPLGAKLVCTELHNAVAIKSVVNVIENESEAD SDEPFIGIRIHSVVSEKDLNIEGIYQQEGHVGDRGESHATPETTSVYPECHPRSPTSPSS HTHSSAAPCLSSCSSSCSIHHHPPSLPPPPLPTTPPPSHPAASTPTTTCCNPSSTNPSLP STALSTTHTNPSTPEHNPTANHHNPTTTPTSPTISGLSSPTTSHPHPSTSSSPFTPMSLV LSSPVQPLPSSSPSAPLASSHAHTHPPASPSSPSVFSPADSPPSSLPSPVHPSNSVDTTI LPPSSPYSPMTRPSSPTSPASLPSRADSPPSPTLSVESPPASPVPSPGLASHEAQHASPH VLTELAKASPLEVGDLPNSQVELWDKRQMECCQVEPPVEAEVEPVGGTVVQTSVCANISP LVDTQDELPADTQVNPSGDTQVESSEDTQTEASLGEGETQVESCESTQVDDVSEPEQGEA EDQQLAREVSSYCERVSEENNPDMGPMKIKFRLRQKVDSHPSLGAEKKECNKENGIPKIV LTLKGNGPNKEYSCSNRLRSEDQSFSGVTVNNKKHKSKKDKKQKLKDKEKTKKSLRGNKH KRQLELFGEDSNDSCDIISNKCNGLNGQNEDHHKSEVDSQKSLHLPLAFPTLGESPERSD DDFLPLPPKRESYAFSVKVERVCKKIKHSSTSDSLDDSLSDSLPDLDPLPAAPEDVEGLA SHDKKVEKSVQESKHKVVAEKHQETTTQQDLDLPNTITCVKTSQEDTNTSQHSVENQDEM QEVTESSTCQHASKEIPETSTSQPDLEKMAEKSINQPGTEKTHEKSTLQKSLEKIAKRSI SQSGPEKYNRHTSHEKISKKSTTQQGTEKITEKSTSQPGPDPCENTRGSTLRSRRERIVK NTKSDRDSDRCLWVSFGVDGPVPLPTSDMPSLEPILDNGDNAKASKASDGHLDPASSHPT EKSTRDVEKCRRDRNSQVVATRKSQGGKNSEAKLEKSVNAVDCVVEEKDYNERHKRCLSS QSQLNNREVKDSSLGRKHMRVEQTHRKSSIHRTKECDARLRPTDKLGGSRSKRSSRSSTQ ERKEMVEGSGAKATPAETVAKGDDIASQEHGTNTSINDASKNEKTESLASDGAERDEVAG EETHSHSEELKPPEGNATSLGVTSSSDEPGGSHTNEEQPSSSDNAQKHLESPDKPGAMEG EDDSQYYRPKKIRRMSDTKLSRENVSDNASSVDLQDPRTSWLVVSETDKYLSKERNLSVN ENQVCAKSITAPDATPSEAHVMNSPGIGSSASKVTSDTSEVEMDTQEIVPEGVSQRDDLA KTCSSVSQDSSGDRGQKKRKPRSRTYLKQNSKVGSQEDCGDDVSSPLRGEDKEEGTSDKL DSASREDSMSSKEDVQSQETPQKDEKEKKRKTRKEKKKNGSDSDSDSRSQGDSVSKSRAL QEAQQRREVLNEEERGRRLAQEIKGFNWLEQKIKNGSLLSPGSSSTPSTPTTPRDPPGLI SKTPFTSSLSSDPPTPSSAPPFPSLSRKREEEEPRRCSLSGGIGLRRHLQTAVPPLAPLS RVTAQPKRRLSPTQLPPATPTTPSPLYSPTNVHSMTVQGTINPTVPALFGPAHSKPGKPS GAGEPTDSNKATLYSSTTCNKATLYGVNSDNLEVFIDSVKTTPNYYGSVTSNNTTLSDDT ITTPSNYYGSKTLASVQHPAMLSSSGVGSHPSVITTTAPADWAQPEVGYFGLPYYNNPVS SSHVSTDQGVGRQSDSGNNYSKSNTTTVTAAPPQFSHKHTLLRRAFQEMLKSDSESSPEL VQKEKSVFKFDDAADLPKTHDEASKITEMLDVSTHVMTATTSKSLDLVDDESSKLYIPKD EISESTILQVETKFTPLKKEIEPPGANDSNEEIAVDITTHESQDTKTREMKIIEKLPAGV LESIKEGGGKFDVKSLKGETKSESDIQGKEEDREMQSSLLLSVLYKELMRTRQEVEELRK VQEQMLTEKGEKKEDNTEETKKEEGLDSSDKKGEKRKCSDDANYKSVLDNKESTLQPEAK KSKISIRSDLLLTDNMITTTSPATTSDSSDLPRDSPSLLPRSSPPLLKTNTQIIPTTKVP LTSPVLPDPGFELSVISLVNSSAPQTSHVLSRTSPGISMTSPGISRTSPGLPRTSPGLPR TSPGLPRTSPGLPRTSPGLPRTSPGLPRTSPGLPRTSPGSIGNSPGVSGTSPGPPRTSPV IMQAMTVPHSNSVSQNSHIVSYTSPAILQSPIMSDSPVLNSNVAMSKMTIGQPTISPGIP RSRPSISSTITAIPISSPTASRTSPVISRTSPVISRVSPAVSRMSPVIARATSIPASKSD SHLAAMSPDKLRTVFGISNSEVEVMPVSVGGKYPLPEPSPQTYLKVLDEFQHLPQESPLL LNAVKGVRRDSLPADVEVLASTGLPHFRHNRIPHEDTRRTRQSQENEVKHIAFAPSDPTD LQQQSLRKQPPPLKSAASLVRRYSDSLDVHQINPLMHRLMYPSTHPNPAVSIHSTNSSTE QQKMASLYSFAQPQCNPTQYPPNAQTGRRNSESSCSERSREYQQAVALSMQHQYQQHLGA NTPMMRSLGPDKASIFPIPSPMSTVIRPYKPPSPPVSNRSALEYQSENFYRSNMPFFERL RENIQQSGIPSADRGHAGQKRLQPATGTVEKPPQPQTFAPRVLVRESVPETSSHMPPPSF STTHFANTNQHLPNVMPNHHGHYPNNMHPSSTIHHLPQTGVLPGNHQVASSVIANTNSNQ RNNSGGNSTGEKKQCLNCPQPARFLCSGCKKAWYCSEQCQRDHWRMHSAMCSL NT seq 8982 nt NT seq  +upstreamnt  +downstreamnt atggcagcgccacaacaacatacactgactaacacctctaccatcgttgcctctcctgcc gtcctcgctgctgcctccgtcaataccacctcctcagcctccgccgacacctatggtagc ggtcaccacgcgtcctgtgacgaggtgtatagccgactgagtggtgtgggtgtgggcggc ctcaatccgcccaccacccccgcccactacccacctctccctgcttcacgtcgcctgcgt ccctgctccctgtgtggcactgccgccctgcgtccacacacccccatcgtgcccacctcc cccgtaggagcccttgaacagccagttgttctcctacaccgcctagaggacggcctcccc cagggtgacgtgaacagtctccgcgcttacggcaccatccgtctgctacctgtccacagc cccacacataatgccacctcagaggatgacaggagtgatcaagacggtgacagtaatgag cgaccggtgaaccatgccatggcgcaccccaaacacaccgatgacgcaggtaaacacgag gacacgagtagcagcgctcactacgccagctggacgtgcagtaacggtgaacactcgctc agtgacgagcatagtgtaggtgaagtgcctcttggtgccaagttagtgtgtacagagctg cataatgcagtagcaataaaaagtgttgttaatgtgatagaaaacgaaagtgaggctgac agtgacgagccttttataggtataagaatacacagtgttgtgtcggagaaagacttaaac attgagggaatataccaacaggagggccatgtcggtgacaggggtgagagccacgccacc ccggagactaccagtgtgtatcccgaatgtcaccccaggtcccccacctccccttcctct cacactcactcctcagctgccccctgcctatcttcttgttcttcgtcctgctccatacac caccacccgccctcactcccaccccctcccttaccaaccactccaccaccctcacacccc gccgcatcaactccaaccaccacgtgttgtaacccttcatccacgaatccatccttgcca tccactgcactctcaaccacacacacgaatccatcaaccccagaacataacccaacagcc aaccaccacaacccaacaaccacgccaacctccccgacaatctctggtctctcgagtccc accacaagtcacccccatccctcaacttcctcctccccattcacccccatgtcactggtt ctctcatcccccgtacaaccccttccctcatcctcgcccagtgctcccctcgcatcctct cacgcccacacacatcccccggcctccccatcctctccatctgtcttctcacccgcggac tccccaccttcatccttaccttctccagtccatccctcgaattcagtagacactactatt ctgcctccctcctccccatactctcccatgactcgaccttcttccccgacgtccccagcc tccctgccctcccgtgccgactctcctccatctcccacactgtctgtcgagtctcctcct gcgtcgcccgtcccttccccgggtctggccagtcacgaggctcagcatgcatccccacat gtgcttactgaactcgctaaggcctcaccactcgaggtcggggacttgcccaactctcag gtcgaactatgggataaaagacaaatggaatgttgccaagtcgagccaccagtagaagct gaagtcgaacctgtggggggcactgttgttcagacgtcagtatgtgcaaacatcagtccc ctggtggatactcaggacgaactgccagcagacactcaagtcaacccgtcaggagacact caggtcgaatcctcggaggacactcagacagaggcatcgttgggtgagggcgaaactcag gtggagtcatgtgagagcactcaggtagacgatgtgtctgaacctgagcaaggtgaggct gaggaccagcaactagcacgagaagtgagtagttattgtgaacgtgtgagtgaggagaat aaccccgacatgggaccaatgaaaataaagttcaggttaagacagaaggtggacagccac ccatctcttggtgcagagaaaaaagagtgcaataaagaaaacggtattccaaagattgtg ttaactctgaagggtaatggacccaataaggagtactcttgctcaaataggttaagaagt gaggaccaaagcttttcgggtgtaactgttaataacaaaaaacacaaatcaaagaaagat aaaaaacaaaaattaaaagataaagaaaaaaccaagaaaagcctcagggggaacaaacac aaaagacagcttgagttgtttggtgaagacagcaatgactcgtgtgacatcatcagtaac aagtgcaatgggctgaatggtcaaaacgaagaccatcacaagagcgaggttgatagtcaa aagagtcttcacctgcccctggccttcccgacactgggtgagtcccctgagcgtagtgat gacgatttccttcctttacccccaaaaagggagtcttatgcctttagcgtcaaagtcgag agagtttgtaaaaaaataaaacatagttctactagtgattccctggatgactcattatca gattctttgccagatttggatcctctccctgctgctcctgaggacgttgagggcctcgcg agtcacgacaagaaggtggagaagagtgtccaggagtctaagcataaggtggtggcggag aaacaccaggagaccacaacacaacaagatctggacctccctaacaccatcacctgtgtt aagacttcgcaggaggacaccaacaccagccaacacagtgtagagaatcaggacgagatg caggaagttactgagagttccacctgtcaacacgcctctaaggaaattcctgagacgtca accagtcaaccagatctggagaaaatggctgagaaatcaatcaatcagccaggtactgag aaaactcatgagaaatccacccttcaaaaaagtcttgagaagatagctaagagatcaatc agtcagtcaggtcctgagaaatacaaccgtcatacaagtcatgagaaaatttctaagaaa tcaaccactcaacaaggtactgagaaaattaccgagaaatccaccagtcaaccaggtcct gatccttgtgagaacactcgagggtcaaccttaagaagtcgacgagaaaggatcgtgaag aataccaagtcagacagggattctgatcggtgcttgtgggtgagttttggtgttgatggt ccagtgccgctccccaccagtgacatgcccagcctagaacccatcctcgataatggtgac aatgccaaggcctctaaggcgagtgacggtcaccttgatcctgcctcgtcgcatccaaca gagaaatcaacacgtgatgtggagaagtgtagaagagacagaaactctcaggtagtggcc actcgtaaaagtcaaggggggaaaaattctgaggccaagttagagaaatcagtgaatgca gttgactgtgttgttgaagagaaggattataatgaaagacataaacggtgtttgtccagt caatcacagttaaataatcgtgaagtcaaggattcgtctctcgggaggaagcatatgaga gttgagcagacacatcggaagtcgtcaattcacaggactaaggaatgtgatgctagatta agaccgacagataaactgggtgggtcacggtcaaagcgatcgtccagatcgtcgactcag gaacgtaaagaaatggtggagggtagtggagccaaggccacacctgctgagactgttgcg aaaggtgacgacatcgctagtcaggaacacggtaccaatacctcaattaatgatgccagt aaaaatgaaaagacagagagtttagcgagtgatggtgccgagagggatgaagtggcagga gaggagacacacagtcacagcgaggaactgaagcctcctgaaggtaatgccacctcgctt ggtgtcacttcgtcatctgacgagcctggtggttctcatactaatgaagagcagccaagc agttcagacaatgctcagaaacatttggaatctccagacaaacctggagccatggaaggt gaagatgacagccagtattaccgacccaagaaaatacgaagaatgagtgatacaaaatta tccagagagaatgtgagtgataacgcttcttctgtcgatcttcaagatccaaggacgtct tggttggtcgtctcagagaccgataaatacctatcaaaagagaggaatctcagcgttaac gaaaaccaagtttgtgccaagagtatcactgctcctgacgccactccttcagaagcacat gtgatgaactctcctggcataggatctagtgcttccaaagtcacctctgacacgtctgaa gtggaaatggatacgcaagagatagtgcctgaaggtgtgtcgcagagagacgacctggca aagacgtgttcctcagtctctcaggactcttcgggtgacagaggccagaagaaacgaaag ccacggtccaggacgtatttgaaacagaactcaaaagttgggtcacaggaagactgtggt gacgatgtctcctcccccctgagaggtgaggacaaagaggagggaacctcggataagctg gacagtgcatcaagagaagacagtatgtcgtccaaggaagatgttcagagccaagagaca ccacagaaagacgaaaaggaaaagaagagaaaaacaaggaaagagaagaagaagaacggt tcagattccgacagtgattcacgtagccaaggagacagcgtgagcaagtcgagggcgctg caggaggcacaacagcggcgggaggtgctaaacgaggaggagaggggacgtcggctggct caggagatcaaggggttcaactggctggagcagaagatcaaaaacggatcactactctct cccgggtcctcctccaccccctccaccccaaccacacccagagacccgcctgggctgatc tccaagacgcccttcacctcctcgctgtcctcagacccgcccaccccctcctccgctccc ccgtttccttccttgtccaggaagagggaggaagaggaaccaaggagatgctcgttaagt ggaggcattggtttgagaagacacttgcagacagctgtaccaccacttgccccattgtca agagttactgctcaaccaaaacgtcgcctctcaccaactcagctacctccagcaacacct accacaccttcacctctttacagtcctacaaatgttcatagtatgactgtacagggtacg ataaaccccacagtgccagctttgtttggacctgcccacagcaaacctggaaaacctagt ggtgctggtgaacctacagattctaataaagcaactctgtatagtagcacaacctgtaac aaagcaacattgtatggtgttaacagtgataatttagaagtatttattgacagtgtaaag accactcctaactattatggaagtgtaaccagcaataataccacactcagtgacgacacc atcacaactccatccaactactatggttcaaaaaccttggcgtccgtccagcatccagcc atgttatcttcatcgggtgtaggttctcatccgtccgtcatcactaccacagcaccagca gactgggcacaacctgaagttggttactttgggctaccatactacaacaaccctgtttca agctcacatgtatctacagaccaaggtgttgggcgacaatcggattcaggcaacaactac tctaaatccaataccacaactgtaactgctgctcccccgcagttttcacacaagcacaca ctcctccggcgggccttccaagagatgttaaaaagcgattctgaatcatccccagaatta gtacaaaaggaaaaaagtgtttttaagtttgatgatgctgcagacctacccaagacacat gatgaagcctcgaaaattacagagatgttagatgtttccactcatgtgatgacagcaaca acaagtaaatcccttgatttagtagatgatgaaagttctaaattatacatcccaaaagat gaaatatctgagagtacaattttgcaggttgaaactaagttcacaccattgaagaaagaa atagaaccaccaggtgccaatgactcaaacgaagaaatagcagttgatattacaacacat gaatcacaagacaccaagaccagagaaatgaaaattattgaaaagttgccggcaggagtt ttggaatctataaaagaaggtggaggtaaatttgatgttaaatctctcaagggtgaaaca aaatcggagagtgatattcaaggaaaagaagaagacagagaaatgcaatcatccttacta ctttctgttctgtataaagagttaatgagaacaaggcaagaagttgaagagctaaggaaa gtacaagaacaaatgctcacagagaaaggagagaaaaaggaagacaacacagaggaaacc aaaaaggaagaaggcctcgactctagtgataagaagggtgagaagagaaagtgttcagat gatgccaactataagtcagtattagataataaagaatcaactttacaacctgaagcaaag aaatcaaaaatcagcattcgaagtgatcttctgttaactgataatatgattactacaaca tccccagcaacaacatctgattcttcagatttgccaagagacagtccatcattattaccg agatctagtcccccactcctgaaaactaatacccaaataatacctacaactaaagtccca ttaactagtcccgttttgcctgatccaggttttgaattatctgttattagtttagtaaat tcttcagcaccacaaactagtcatgtattatcaagaacaagtcctggcatatccatgacg agtcctggaatatcaagaacaagtcctggactgccaaggacaagtcctggactgccaaga acaagtcctggactgccaagaacaagtcctgggctgccaaggacaagtcctgggttacca agaacaagtcctgggctgccaaggacaagtcctgggctgccaaggacaagtcctgggtca atagggaatagtcctggagtatcaggaacaagtccagggccaccaagaacaagccctgta ataatgcaagctatgacagtaccacacagtaattcagtgtcacagaattctcatatagtg tcatacacgagtcctgcaatattgcaaagtcctataatgagtgactcgcctgtactaaat tcaaatgttgccatgtcaaaaatgaccattggacaaccaactatcagtcctggaatacct agatccaggccatcaatatccagtactattactgcaataccaatatctagtcccactgca tcaaggactagtccagtgatatctaggacaagcccagtgatatcaagagtaagccctgca gtatctaggatgagccctgtaatagcaagagccactagtattccagccagtaaatcggat tcacatttagcagcaatgagtcctgacaaacttcgtactgtatttgggatctctaattca gaagtagaggtcatgcctgtatcagtaggaggaaagtatcctcttcctgaaccttctcca caaacatatttaaaggtgttggatgaattccaacatctaccccaggaatcgcctcttctg ttgaatgctgtcaagggagtacgacgagatagcttgcctgcagatgttgaagttttagct tcaactggactgccacactttcgtcataacaggatccctcacgaagatacccggagaact cgtcagtctcaagagaatgaagttaagcacattgcatttgccccttctgaccccacagac ttacaacaacaatcattacgaaagcaacctccacctcttaagtcagcagcctcacttgtg agaagatattcagatagcctcgatgtccatcagataaatccattaatgcatcgcctcatg tatcccagtacacacccaaatcctgccgtctcaattcattccacaaattcatccacggag caacaaaaaatggcatctttatattcatttgctcaaccacagtgtaatcctacacagtat cctcccaatgctcaaactgggcggagaaacagtgaaagcagttgcagtgaaagatctcgg gaatatcagcaggctgttgctttgagcatgcaacaccaatatcagcaacacttaggtgcc aacacacctatgatgaggagtcttggaccagataaagcaagtattttcccgataccttca cccatgtcaacagttattcgcccatataaaccaccttcaccacctgtatccaaccgatct gccctggagtatcagagtgagaacttttatcgttcgaatatgccattttttgaaagatta agagaaaacatccagcaatctggaataccttcagcagacagaggacatgcaggtcaaaag aggttacagccagctactggaactgttgaaaaaccccctcaaccacagaccttcgcccct cgggtccttgtccgggagtctgttccagaaacgtcatctcatatgcctcctccatcattt tcaaccacacattttgctaatactaaccaacacttgccgaatgtcatgcccaatcatcat ggccactatccaaataatatgcatccaagttctaccattcatcacctgcctcaaactgga gtacttccaggtaaccatcaagttgcttcatctgtcatagcaaacaccaacagtaatcaa cgcaacaacagtggaggaaatagcactggagagaaaaagcagtgtctaaactgtccccag ccagctagattcctgtgttcagggtgcaagaaagcttggtattgctcagaacaatgtcag cgtgatcattggcgcatgcatagtgccatgtgttctctgtga

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