KEGG   Homarus americanus (American lobster): 121877714
Entry
121877714         CDS       T07477                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like isoform X1
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
hame  Homarus americanus (American lobster)
Pathway
hame03020  RNA polymerase
hame03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121877714
  09124 Replication and repair
   03420 Nucleotide excision repair
    121877714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hame03021]
    121877714
   03400 DNA repair and recombination proteins [BR:hame03400]
    121877714
Transcription machinery [BR:hame03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     121877714
DNA repair and recombination proteins [BR:hame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121877714
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 121877714
NCBI-ProteinID: XP_042239491
LinkDB
Position
Unknown
AA seq 275 aa
MPYANQPSLNLMELTEENIKFYIEDTDLSVANSIRRIFMAETPTIAIDWVQLEENSTVLS
DEFIAHRIGLIPFTSDERIEQMQYSRDCSCTDYCPECSVEFTLDVKCQDDHTRQISTADL
KSSDARVIPVTSRHREDEASEYGESDDILIVKLRKGQSLRLRAYAVKGFGKEHAKWNPTS
SVAFEYDPDNSQRHTLLPKPEEWPKSEYSTLDENTPQAEFDATAKPNKFYYNVESAGALK
PENIILMGIAALKKKLSDLQNQLSMEAQSDALAIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccctatgccaaccaaccatcccttaatttaatggaacttactgaagaaaacattaaa
ttctacatagaagacacagatctaagtgtggccaactccatccgccgaatctttatggca
gagactccaacaatagccattgattgggtccagctggaggaaaactctaccgtcctgagt
gatgagttcatcgctcaccgcattggtctcattcctttcacctcagatgaacgtattgaa
cagatgcagtactcaagggactgctcgtgcacagactactgtccagaatgttccgtagaa
ttcacactggatgtcaagtgtcaggatgaccacactcgccagatctccacagctgatctc
aagtcctccgacgccagagttattcccgtaacgtcacggcaccgtgaagacgaagccagc
gagtatggagagtccgatgacatccttattgtaaagctgcgtaaaggtcaatcgctgaga
ctgcgagcttatgcagtcaaagggtttggaaaggagcacgccaagtggaaccccacaagc
agtgtagccttcgagtacgaccctgacaattcgcagcggcacacacttctccccaagcca
gaagagtggcccaaaagtgaatactccaccctggatgaaaatactccccaggcagagttt
gacgcaacagccaaacccaacaagttctattacaatgtggagagtgccggagcgctcaag
ccagagaatatcatccttatgggcatcgctgctcttaagaagaagctctcagacttacag
aatcagttgagcatggaggcgcagtctgatgctctggccatcaattaa

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