Halobacterium salinarum NRC-34001: LJ422_05305
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Entry
LJ422_05305 CDS
T07949
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
hanr
Halobacterium salinarum NRC-34001
Pathway
hanr00730
Thiamine metabolism
hanr01100
Metabolic pathways
hanr01240
Biosynthesis of cofactors
hanr04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hanr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LJ422_05305
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LJ422_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hanr03016
]
LJ422_05305
Enzymes [BR:
hanr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LJ422_05305
Transfer RNA biogenesis [BR:
hanr03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LJ422_05305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
ATP_bind_3
DUF664
Motif
Other DBs
NCBI-ProteinID:
UEB93069
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All DBs
Position
974175..975353
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AA seq
392 aa
AA seq
DB search
MLPPGADSVVVRHGDVGVKSSHVQSDMERTLRDNVAAMLADRGVPGDVEREWGRVLVRSP
APGRAADAAADTFGVVSASPAVSVAPDLDAISDALAAAARAHYDGGAFAVDARRAGTHDF
DSHDVNRVGGDAVWAAVEDDFQPVVDLDDPDITFFVEVRDAEAFVFLTHRDGPGGMPLGT
QQPLVALVSGGIDSPVAAWESMRRGAPVIPLYLALGDYGGPDHRARAEAAVRTLDDYAPN
HDLSLRVAPAGDAIDRLAAATGRTRMLSFRRFMYRVAEHVAEHAGAAGIVTGEAVGQKSS
QTTANLGVVDRATTLPVHRPLLTWDKQRITAAARSIDTFRDSSLDVGCNRLAPRQPLTAA
PIESVRADEPDALFEWARAVAADTGPVEVAVA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcttccacccggggccgacagcgtcgtcgtcaggcacggcgatgtcggcgtgaaatcc
agtcacgtccagtccgacatggagcggacgctccgggacaacgtcgccgcgatgctcgcc
gaccgcggcgtgcccggcgatgtcgagcgcgaatgggggcgcgtcctcgttcgcagtccc
gcgcccggccgcgcggcggatgcggccgctgacacgttcggcgtcgtctccgccagcccc
gccgtctcagtcgcccccgacctcgacgcgatcagcgacgcgctcgccgccgccgcccgc
gcccactacgacggcggcgcgttcgcggtcgacgcgcgccgcgccggcacccacgacttc
gacagccacgacgtcaaccgcgtgggtggcgacgccgtctgggccgccgtcgaggacgac
ttccagccggtcgttgatctcgacgacccggacatcacgttcttcgtggaagtccgggac
gccgaggcgttcgtgttcctgacacaccgcgacggccccggtggcatgccgcttggcacc
cagcagccgctggtcgcgctcgtctccggcggcatcgactcgccggtcgccgcttgggag
tcgatgcgccggggcgcgcccgtcatcccgctgtatctggcgttgggcgactacggcggc
cccgaccatcgcgcccgcgccgaggcggccgtgcgcacgctcgacgactacgcgcccaac
cacgacctctcgctgcgggtcgcgccggccggcgacgccatcgaccggctggccgcggcg
acggggcgcacgcgcatgctctcgttccggcggttcatgtaccgcgtcgccgagcacgtc
gccgagcacgcgggcgcggccggcatcgtcaccggggaagccgtcggccagaaatcaagt
cagaccaccgcgaacctcggcgtcgtcgaccgcgccaccacgctacccgtccaccgaccg
ctgctcacgtgggacaaacaacgcatcaccgcggccgcccgctccatcgacacgttccgg
gactccagcctcgacgtcggctgcaaccggctcgcgccgcgccagccgctgacggccgcc
cccatcgagagcgtgcgcgccgacgaacccgacgcgctcttcgagtgggcgcgcgcggtc
gccgccgacaccggccccgtggaggtggcggtcgcgtga
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